Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_01240 and CSW01_01245 overlap by 4 nucleotidesCSW01_01245 and CSW01_01250 overlap by 4 nucleotidesCSW01_01250 and CSW01_01255 are separated by 1 nucleotidesCSW01_01255 and CSW01_01260 are separated by 7 nucleotides CSW01_01240: CSW01_01240 - lipopolysaccharide biosynthesis protein, at 239,355 to 240,404 _01240 CSW01_01245: CSW01_01245 - lipopolysaccharide heptosyltransferase II, at 240,401 to 241,441 _01245 CSW01_01250: CSW01_01250 - polymerase, at 241,438 to 242,637 _01250 CSW01_01255: CSW01_01255 - acyltransferase, at 242,639 to 243,205 _01255 CSW01_01260: CSW01_01260 - polysaccharide deacetylase, at 243,213 to 244,985 _01260
Group Condition CSW01_01240 CSW01_01245 CSW01_01250 CSW01_01255 CSW01_01260
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B -0.5 -1.1 -0.5 -0.3 -0.7
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.7 -1.0 -0.3 -0.4 -0.3
lb_anaerobic LB_Anaerobic_18HR_ZN20A -0.8 -1.2 -0.1 -0.2 -0.4
lb_aerobic LB_Aerobic_18HR_ZN18A -0.3 -1.0 -0.2 -0.2 -0.4
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B -0.3 -1.1 -0.0 -0.3 -0.2
lb_anaerobic LB_Anaerobic_180MIN_ZN16A -0.4 -0.8 -0.1 -0.2 -0.3
phage NoPhageControl -0.2 -1.1 -0.1 -0.1 -0.1
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A -0.3 -1.4 +0.6 -0.2 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A -0.2 -0.9 +0.2 -0.1 +0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A -0.3 -0.9 +0.8 -0.1 +0.5
lb_aerobic LB_Aerobic_18HR_ZN18B -0.2 -0.5 +0.8 -0.1 +0.5
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B -0.1 +0.1 +0.8 +0.2 +0.7
lb_anaerobic LB_Anaerobic_60MIN_ZN4B +0.0 +0.6 +1.0 +0.1 +0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A +0.0 +0.8 +1.1 +0.2 +0.8
phage ICP3_phage_0.41_MOI_rep2 -0.7 +3.4 +4.8 +1.5 +4.1
phage ICP3_phage_4.1_MOI_rep2 -0.8 +3.4 +4.7 +1.6 +4.1
phage ICP3_phage_41.1_MOI_rep1 -0.4 +3.3 +4.7 +1.4 +4.1
phage ICP3_phage_4.1_MOI_rep1 -0.8 +3.6 +4.8 +1.4 +4.1
phage ICP3_phage_411_MOI_rep1 -0.5 +3.3 +4.8 +1.6 +4.1
phage ICP3_phage_0.41_MOI_rep1 -0.7 +3.6 +4.8 +1.5 +4.2
phage ICP1_phage_23.5_MOI_rep2 -0.8 +3.4 +4.7 +1.9 +4.6
phage ICP3_phage_411_MOI_rep2 -0.7 +3.7 +4.7 +1.8 +4.3
phage ICP1_phage_0.23_MOI_rep2 -0.9 +3.6 +4.7 +1.8 +4.7
phage ICP1_phage_2.3_MOI_rep1 -0.5 +3.5 +4.7 +2.0 +4.6
phage ICP3_phage_41.1_MOI_rep2 -0.5 +3.9 +4.8 +1.9 +4.2
phage ICP1_phage_235.3_MOI_rep2 -0.4 +3.4 +4.8 +2.0 +4.6
phage ICP1_phage_2.3_MOI_rep2 -0.4 +3.5 +4.8 +1.9 +4.6
phage ICP1_phage_235.3_MOI_rep1 -0.3 +3.4 +4.7 +1.9 +4.6
phage ICP1_phage_23.5_MOI_rep1 -0.2 +3.5 +4.7 +2.0 +4.6
phage ICP1_phage_0.23_MOI_rep1 -0.1 +3.8 +4.8 +2.0 +4.7
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CSW01_01240
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CSW01_01245
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CSW01_01260
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