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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01235 and CSW01_01240 overlap by 4 nucleotides
CSW01_01240 and CSW01_01245 overlap by 4 nucleotides
CSW01_01245 and CSW01_01250 overlap by 4 nucleotides
CSW01_01250 and CSW01_01255 are separated by 1 nucleotides
CSW01_01235: CSW01_01235 - glycosyl transferase, at 238,570 to 239,358
_01235
CSW01_01240: CSW01_01240 - lipopolysaccharide biosynthesis protein, at 239,355 to 240,404
_01240
CSW01_01245: CSW01_01245 - lipopolysaccharide heptosyltransferase II, at 240,401 to 241,441
_01245
CSW01_01250: CSW01_01250 - polymerase, at 241,438 to 242,637
_01250
CSW01_01255: CSW01_01255 - acyltransferase, at 242,639 to 243,205
_01255
Group
Condition
CSW01
_01235
CSW01
_01240
CSW01
_01245
CSW01
_01250
CSW01
_01255
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
-0.7
-1.0
-0.3
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.2
-0.5
-1.1
-0.5
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.2
-0.8
-1.2
-0.1
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.2
-0.3
-1.0
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
-0.3
-1.1
-0.0
-0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.2
-0.4
-0.8
-0.1
-0.2
phage
NoPhageControl
-0.1
-0.2
-1.1
-0.1
-0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
-0.3
-1.4
+0.6
-0.2
phage
NoPhageControl
-0.1
-0.2
-0.9
+0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
-0.2
-0.9
+0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
-0.3
-0.9
+0.8
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
-0.2
-0.5
+0.8
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.0
+0.0
+0.6
+1.0
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
+0.0
+0.8
+1.1
+0.2
phage
ICP3_phage_41.1_MOI_rep1
-0.8
-0.4
+3.3
+4.7
+1.4
phage
ICP3_phage_0.41_MOI_rep2
-0.6
-0.7
+3.4
+4.8
+1.5
phage
ICP3_phage_4.1_MOI_rep2
-0.5
-0.8
+3.4
+4.7
+1.6
phage
ICP3_phage_4.1_MOI_rep1
-0.4
-0.8
+3.6
+4.8
+1.4
phage
ICP1_phage_23.5_MOI_rep2
-0.5
-0.8
+3.4
+4.7
+1.9
phage
ICP3_phage_0.41_MOI_rep1
-0.4
-0.7
+3.6
+4.8
+1.5
phage
ICP3_phage_411_MOI_rep1
-0.3
-0.5
+3.3
+4.8
+1.6
phage
ICP3_phage_411_MOI_rep2
-0.6
-0.7
+3.7
+4.7
+1.8
phage
ICP1_phage_2.3_MOI_rep1
-0.6
-0.5
+3.5
+4.7
+2.0
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.9
+3.6
+4.7
+1.8
phage
ICP1_phage_235.3_MOI_rep2
-0.5
-0.4
+3.4
+4.8
+2.0
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.4
+3.5
+4.8
+1.9
phage
ICP3_phage_41.1_MOI_rep2
-0.4
-0.5
+3.9
+4.8
+1.9
phage
ICP1_phage_235.3_MOI_rep1
-0.1
-0.3
+3.4
+4.7
+1.9
phage
ICP1_phage_23.5_MOI_rep1
-0.2
-0.2
+3.5
+4.7
+2.0
phage
ICP1_phage_0.23_MOI_rep1
-0.2
-0.1
+3.8
+4.8
+2.0
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