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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01130 and CSW01_01135 overlap by 4 nucleotides
CSW01_01135 and CSW01_01140 overlap by 45 nucleotides
CSW01_01140 and CSW01_01145 are separated by 65 nucleotides
CSW01_01145 and CSW01_01150 are separated by 167 nucleotides
CSW01_01130: CSW01_01130 - lipid A biosynthesis lauroyl acyltransferase, at 220,386 to 221,342
_01130
CSW01_01135: CSW01_01135 - nucleoid occlusion factor SlmA, at 221,339 to 221,929
_01135
CSW01_01140: CSW01_01140 - lipid A biosynthesis lauroyl acyltransferase, at 221,885 to 222,022
_01140
CSW01_01145: CSW01_01145 - bifunctional phosphopantothenoylcysteine decarboxylase CoaC/phosphopantothenate--cysteine ligase CoaB, at 222,088 to 223,287
_01145
CSW01_01150: CSW01_01150 - methyl-accepting chemotaxis protein, at 223,455 to 225,149
_01150
Group
Condition
CSW01
_01130
CSW01
_01135
CSW01
_01140
CSW01
_01145
CSW01
_01150
phage
ICP3_phage_0.41_MOI_rep1
N.D.
+0.3
-2.2
N.D.
-0.0
phage
ICP3_phage_411_MOI_rep1
N.D.
-0.1
-1.3
N.D.
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
N.D.
-0.3
-0.6
N.D.
-0.1
phage
ICP1_phage_2.3_MOI_rep1
N.D.
+0.3
-1.3
N.D.
+0.1
phage
ICP1_phage_2.3_MOI_rep2
N.D.
-0.2
-0.6
N.D.
-0.1
phage
ICP3_phage_41.1_MOI_rep2
N.D.
-0.4
-0.6
N.D.
+0.2
phage
ICP1_phage_0.23_MOI_rep1
N.D.
-0.5
-0.3
N.D.
-0.1
phage
ICP3_phage_411_MOI_rep2
N.D.
+0.1
-0.9
N.D.
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
N.D.
-0.2
-0.4
N.D.
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
N.D.
-0.3
-0.4
N.D.
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
N.D.
-0.2
-0.4
N.D.
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
N.D.
-0.2
-0.5
N.D.
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
-0.1
-0.5
N.D.
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
-0.4
-0.3
N.D.
-0.0
phage
ICP1_phage_235.3_MOI_rep2
N.D.
-0.2
-0.2
N.D.
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
-0.2
-0.3
N.D.
-0.0
phage
ICP3_phage_41.1_MOI_rep1
N.D.
-0.1
-0.4
N.D.
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
-0.0
-0.3
N.D.
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
N.D.
+0.0
-0.3
N.D.
-0.0
phage
ICP3_phage_0.41_MOI_rep2
N.D.
+0.1
-0.5
N.D.
+0.1
phage
NoPhageControl
N.D.
-0.2
-0.2
N.D.
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
N.D.
+0.0
-0.2
N.D.
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
N.D.
+0.2
-0.3
N.D.
-0.0
phage
NoPhageControl
N.D.
-0.2
+0.1
N.D.
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
N.D.
+0.2
-0.2
N.D.
-0.0
phage
ICP3_phage_4.1_MOI_rep1
N.D.
+0.4
-0.3
N.D.
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
N.D.
+0.2
-0.2
N.D.
+0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
N.D.
+0.1
+0.2
N.D.
-0.0
phage
ICP1_phage_23.5_MOI_rep2
N.D.
+0.1
+0.3
N.D.
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
N.D.
+0.5
+0.1
N.D.
+0.0
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