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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01115 and CSW01_01120 are separated by 365 nucleotides
CSW01_01120 and CSW01_01125 are separated by 85 nucleotides
CSW01_01125 and CSW01_01130 are separated by 10 nucleotides
CSW01_01130 and CSW01_01135 overlap by 4 nucleotides
CSW01_01115: CSW01_01115 - ribonuclease PH, at 217,589 to 218,305
_01115
CSW01_01120: CSW01_01120 - orotate phosphoribosyltransferase, at 218,671 to 219,312
_01120
CSW01_01125: CSW01_01125 - lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, at 219,398 to 220,375
_01125
CSW01_01130: CSW01_01130 - lipid A biosynthesis lauroyl acyltransferase, at 220,386 to 221,342
_01130
CSW01_01135: CSW01_01135 - nucleoid occlusion factor SlmA, at 221,339 to 221,929
_01135
Group
Condition
CSW01
_01115
CSW01
_01120
CSW01
_01125
CSW01
_01130
CSW01
_01135
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.3
-1.1
-2.9
N.D.
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.5
-1.0
-2.7
N.D.
-0.3
phage
ICP1_phage_235.3_MOI_rep1
-0.3
+0.2
-2.1
N.D.
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.0
+0.1
-2.0
N.D.
-0.4
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.2
-2.4
N.D.
+0.1
phage
ICP3_phage_411_MOI_rep2
-0.5
+0.2
-2.0
N.D.
+0.1
phage
ICP3_phage_411_MOI_rep1
-0.1
+0.1
-1.9
N.D.
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.1
+0.3
-2.4
N.D.
+0.0
phage
ICP3_phage_41.1_MOI_rep1
-0.3
+0.0
-1.6
N.D.
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.3
-0.0
-1.4
N.D.
-0.2
phage
ICP1_phage_0.23_MOI_rep1
-0.2
+0.2
-1.3
N.D.
-0.5
phage
ICP1_phage_23.5_MOI_rep2
-0.3
+0.4
-2.1
N.D.
+0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.4
+0.4
-2.1
N.D.
+0.3
phage
ICP3_phage_4.1_MOI_rep1
-0.2
+0.2
-2.2
N.D.
+0.4
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
-1.2
-0.1
N.D.
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
-0.2
-1.2
N.D.
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.4
-1.1
+0.0
N.D.
-0.2
phage
ICP1_phage_235.3_MOI_rep2
-0.2
+0.0
-1.3
N.D.
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
-0.2
-1.0
N.D.
-0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.1
+0.1
-1.5
N.D.
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
-0.1
-1.0
N.D.
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.3
-0.0
-0.7
N.D.
-0.4
phage
ICP1_phage_0.23_MOI_rep2
-0.3
+0.0
-1.0
N.D.
-0.1
phage
NoPhageControl
-0.3
-0.1
-0.6
N.D.
-0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.1
+0.3
-1.7
N.D.
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.4
-0.5
+0.1
N.D.
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
-0.2
+0.6
N.D.
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.3
-0.2
+0.6
N.D.
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.3
-0.1
+0.6
N.D.
+0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.4
-0.1
+0.7
N.D.
+0.2
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