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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01070 and CSW01_01075 overlap by 10 nucleotides
CSW01_01075 and CSW01_01080 overlap by 4 nucleotides
CSW01_01080 and CSW01_01085 are separated by 26 nucleotides
CSW01_01085 and CSW01_01090 are separated by 42 nucleotides
CSW01_01070: CSW01_01070 - ABC transporter ATP-binding protein, at 208,721 to 209,506
_01070
CSW01_01075: CSW01_01075 - iron(III) ABC transporter substrate-binding protein, at 209,497 to 210,456
_01075
CSW01_01080: CSW01_01080 - Fe(3+)-hydroxamate ABC transporter permease FhuB, at 210,453 to 212,414
_01080
CSW01_01085: CSW01_01085 - MurR/RpiR family transcriptional regulator, at 212,441 to 213,289
_01085
CSW01_01090: CSW01_01090 - hypothetical protein, at 213,332 to 213,523
_01090
Group
Condition
CSW01
_01070
CSW01
_01075
CSW01
_01080
CSW01
_01085
CSW01
_01090
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
-0.2
-0.2
-0.1
N.D.
phage
ICP1_phage_2.3_MOI_rep2
-0.6
+0.1
+0.0
-0.0
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
-0.1
-0.2
-0.1
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.3
-0.1
-0.1
-0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.0
-0.2
-0.2
-0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
-0.2
-0.1
+0.0
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.2
-0.2
+0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
-0.1
-0.1
+0.0
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
-0.1
-0.1
+0.0
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
-0.0
-0.0
-0.1
N.D.
phage
ICP3_phage_411_MOI_rep2
-0.2
-0.1
-0.0
+0.0
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.0
-0.1
-0.1
-0.1
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.2
-0.1
-0.0
+0.1
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
-0.1
-0.1
+0.2
N.D.
phage
ICP3_phage_0.41_MOI_rep1
-0.3
+0.0
+0.2
+0.0
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.2
-0.1
+0.0
+0.2
N.D.
phage
NoPhageControl
-0.2
+0.1
+0.1
-0.0
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.4
+0.1
+0.1
+0.1
N.D.
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
-0.1
-0.0
+0.1
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-0.1
-0.1
-0.0
+0.2
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.2
-0.1
+0.0
+0.3
N.D.
phage
ICP3_phage_41.1_MOI_rep1
-0.0
-0.1
+0.2
+0.2
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.0
-0.1
+0.2
+0.2
N.D.
phage
ICP1_phage_235.3_MOI_rep2
-0.2
+0.2
+0.2
+0.1
N.D.
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.2
-0.1
+0.0
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.1
+0.0
+0.0
+0.2
N.D.
phage
ICP1_phage_0.23_MOI_rep1
+0.1
-0.1
+0.1
+0.2
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.3
+0.1
-0.1
+0.0
N.D.
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.2
+0.1
+0.1
+0.1
N.D.
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
+0.1
-0.0
+0.2
N.D.
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