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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01025 and CSW01_01030 are separated by 74 nucleotides
CSW01_01030 and CSW01_01035 are separated by 147 nucleotides
CSW01_01035 and CSW01_01040 are separated by 161 nucleotides
CSW01_01040 and CSW01_01045 are separated by 160 nucleotides
CSW01_01025: CSW01_01025 - LysE family translocator, at 197,131 to 197,799
_01025
CSW01_01030: CSW01_01030 - AraC family transcriptional regulator, at 197,874 to 198,686
_01030
CSW01_01035: CSW01_01035 - gamma-glutamyltransferase, at 198,834 to 200,600
_01035
CSW01_01040: CSW01_01040 - protein RarD, at 200,762 to 201,670
_01040
CSW01_01045: CSW01_01045 - DNA helicase RecQ, at 201,831 to 203,666
_01045
Group
Condition
CSW01
_01025
CSW01
_01030
CSW01
_01035
CSW01
_01040
CSW01
_01045
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
-0.1
-0.2
-0.0
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
-0.0
-0.1
-0.1
-0.7
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
-0.0
-0.1
-0.2
-0.5
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
-0.1
-0.2
+0.0
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.3
-0.0
-0.2
-0.1
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.3
-0.0
-0.2
-0.1
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.3
-0.2
-0.2
-0.0
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.3
+0.0
-0.1
-0.2
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.3
-0.1
-0.1
-0.1
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.1
-0.0
-0.0
-0.1
-0.5
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
+0.0
-0.1
-0.1
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
-0.0
-0.2
+0.0
-0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
+0.2
-0.0
-0.1
-0.4
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
+0.0
-0.1
+0.1
-0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.2
+0.1
-0.1
+0.1
-0.4
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
+0.1
-0.1
+0.1
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.0
-0.0
-0.2
+0.2
-0.2
phage
ICP3_phage_411_MOI_rep1
-0.5
+0.2
-0.1
+0.4
-0.0
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.1
-0.1
+0.3
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
+0.1
-0.1
+0.2
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.3
-0.1
-0.1
+0.1
-0.1
phage
ICP1_phage_23.5_MOI_rep1
+0.1
+0.1
-0.2
+0.4
-0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.2
+0.1
+0.1
+0.2
-0.4
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.3
+0.1
-0.1
-0.2
phage
ICP1_phage_2.3_MOI_rep2
+0.3
+0.1
-0.1
+0.2
-0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.4
-0.0
+0.0
-0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.5
+0.2
-0.2
+0.1
-0.2
phage
ICP3_phage_41.1_MOI_rep1
-0.3
+0.2
+0.1
+0.7
-0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.0
+0.1
+0.4
-0.1
phage
ICP1_phage_235.3_MOI_rep1
+0.1
+0.2
+0.0
+0.5
-0.1
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