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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_01000 and CSW01_01005 are separated by 105 nucleotides
CSW01_01005 and CSW01_01010 are separated by 279 nucleotides
CSW01_01010 and CSW01_01015 are separated by 137 nucleotides
CSW01_01015 and CSW01_01020 are separated by 84 nucleotides
CSW01_01000: CSW01_01000 - glutathione-disulfide reductase, at 189,458 to 190,810
_01000
CSW01_01005: CSW01_01005 - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ, at 190,916 to 191,755
_01005
CSW01_01010: CSW01_01010 - oligopeptidase A, at 192,035 to 194,077
_01010
CSW01_01015: CSW01_01015 - DNA helicase II, at 194,215 to 196,386
_01015
CSW01_01020: CSW01_01020 - hypothetical protein, at 196,471 to 196,656
_01020
Group
Condition
CSW01
_01000
CSW01
_01005
CSW01
_01010
CSW01
_01015
CSW01
_01020
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
-0.0
-0.2
-4.5
-0.5
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
-0.1
-0.2
-4.2
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.0
+0.0
-0.2
-3.2
-0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
+0.1
-0.2
-3.0
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.3
-0.0
+0.1
-2.9
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.1
-0.0
+0.2
-2.5
-0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
-0.0
+0.2
-2.4
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
-0.0
-0.2
-1.8
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.1
-0.0
-0.1
-1.7
-0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.0
+0.0
+0.1
-2.1
-0.2
phage
ICP3_phage_41.1_MOI_rep1
-0.3
+0.1
-0.3
-0.9
-0.7
phage
ICP1_phage_23.5_MOI_rep2
-0.2
-0.1
-0.1
-0.9
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
-0.1
-0.0
-1.7
-0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.3
-0.1
-0.1
-0.8
-0.5
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.0
+0.2
+0.0
-1.6
-0.2
phage
ICP1_phage_0.23_MOI_rep2
-0.3
-0.0
+0.0
-0.9
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.2
-0.3
-0.1
-0.7
-0.0
phage
NoPhageControl
-0.0
-0.0
-0.1
-1.0
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
-0.0
-0.0
-0.9
-0.4
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.1
+0.1
-0.8
-0.4
phage
ICP1_phage_0.23_MOI_rep1
-0.2
-0.0
+0.0
-0.7
-0.4
phage
ICP3_phage_4.1_MOI_rep1
-0.4
+0.2
-0.1
-0.4
-0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.0
-0.0
+0.1
-1.0
-0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
-0.0
-0.1
-0.9
-0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.2
+0.1
+0.3
-1.0
-0.2
phage
ICP1_phage_23.5_MOI_rep1
-0.4
+0.0
-0.2
-0.7
+0.2
phage
ICP3_phage_411_MOI_rep1
-0.1
-0.1
-0.1
-0.9
+0.2
phage
ICP3_phage_411_MOI_rep2
-0.5
+0.1
+0.1
-0.8
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
+0.1
+0.3
-0.8
-0.0
phage
ICP1_phage_235.3_MOI_rep2
-0.2
+0.3
-0.2
-0.6
+0.9
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