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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00925 and CSW01_00930 are separated by 174 nucleotides
CSW01_00930 and CSW01_00935 are separated by 252 nucleotides
CSW01_00935 and CSW01_00940 are separated by 66 nucleotides
CSW01_00940 and CSW01_00945 are separated by 208 nucleotides
CSW01_00925: CSW01_00925 - ABC transporter permease, at 173,031 to 173,969
_00925
CSW01_00930: CSW01_00930 - SPOR domain-containing protein, at 174,144 to 175,091
_00930
CSW01_00935: CSW01_00935 - deoxycytidylate deaminase, at 175,344 to 176,942
_00935
CSW01_00940: CSW01_00940 - hypothetical protein, at 177,009 to 177,242
_00940
CSW01_00945: CSW01_00945 - XRE family transcriptional regulator, at 177,451 to 177,759
_00945
Group
Condition
CSW01
_00925
CSW01
_00930
CSW01
_00935
CSW01
_00940
CSW01
_00945
phage
ICP1_phage_23.5_MOI_rep1
-0.3
-0.0
-0.1
-4.5
+0.4
phage
ICP3_phage_41.1_MOI_rep1
-0.0
-0.0
-0.0
-4.6
+0.4
phage
ICP3_phage_0.41_MOI_rep1
+0.1
-0.0
-0.0
-4.5
+0.4
phage
ICP1_phage_0.23_MOI_rep2
+0.3
-0.1
-0.0
-4.5
+0.5
phage
ICP1_phage_2.3_MOI_rep2
+0.2
-0.3
-0.1
-2.4
+0.4
phage
ICP3_phage_4.1_MOI_rep1
+0.1
-0.3
-0.1
-1.1
+0.5
phage
NoPhageControl
+0.2
+0.0
-0.0
-1.1
+0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
-0.2
-0.0
+0.1
-0.4
phage
ICP3_phage_4.1_MOI_rep2
+0.2
-0.3
-0.1
-0.7
+0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.3
-0.2
-0.1
+0.3
-0.1
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.0
-0.0
-0.4
+0.1
phage
NoPhageControl
+0.1
+0.1
-0.0
-0.7
+0.2
phage
ICP1_phage_23.5_MOI_rep2
-0.0
-0.1
-0.1
-0.6
+0.5
phage
ICP1_phage_235.3_MOI_rep1
-0.0
+0.0
+0.0
-0.8
+0.4
phage
ICP1_phage_235.3_MOI_rep2
-0.1
-0.4
-0.0
-0.4
+0.6
phage
ICP1_phage_0.23_MOI_rep1
-0.2
-0.4
-0.1
-0.2
+0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.2
-0.1
-0.1
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.2
-0.1
-0.0
+0.2
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.3
-0.1
-0.0
+0.3
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
-0.1
-0.0
+0.6
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.3
+0.0
-0.1
+0.6
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.3
-0.1
-0.0
+0.7
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
-0.1
+0.0
+0.4
-0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.2
-0.0
-0.3
+0.5
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.3
-0.1
+0.0
+0.7
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
+0.1
+0.1
+0.2
+0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.0
+0.0
+0.0
+0.7
phage
ICP3_phage_41.1_MOI_rep2
-0.0
-0.2
-0.0
+0.6
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
-0.1
+0.0
+1.3
-0.0
phage
ICP3_phage_411_MOI_rep1
+0.4
+0.2
-0.0
+0.0
+0.5
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