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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00770 and CSW01_00775 are separated by 55 nucleotides
CSW01_00775 and CSW01_00780 are separated by 39 nucleotides
CSW01_00780 and CSW01_00785 are separated by 36 nucleotides
CSW01_00785 and CSW01_00790 are separated by 397 nucleotides
CSW01_00770: CSW01_00770 - hypothetical protein, at 142,480 to 142,719
_00770
CSW01_00775: CSW01_00775 - HTH-type transcriptional repressor FabR, at 142,775 to 143,416
_00775
CSW01_00780: CSW01_00780 - hypothetical protein, at 143,456 to 143,827
_00780
CSW01_00785: CSW01_00785 - tRNA (uridine(54)-C5)-methyltransferase TrmA, at 143,864 to 144,973
_00785
CSW01_00790: CSW01_00790 - vitamin B12 transporter BtuB, at 145,371 to 147,206
_00790
Group
Condition
CSW01
_00770
CSW01
_00775
CSW01
_00780
CSW01
_00785
CSW01
_00790
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.0
-0.4
-0.3
-0.1
phage
ICP3_phage_0.41_MOI_rep2
-0.0
-0.4
-0.2
+0.1
-0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
-0.1
-0.6
+0.1
-0.0
phage
ICP1_phage_0.23_MOI_rep1
-0.7
+0.1
+0.3
+0.1
-0.3
phage
NoPhageControl
-0.1
+0.1
-0.3
-0.1
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.1
-0.6
+0.2
-0.2
phage
ICP1_phage_0.23_MOI_rep2
-0.3
+0.0
+0.2
+0.1
-0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.3
-0.0
-0.3
-0.0
-0.2
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.2
+0.1
-0.2
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.2
+0.1
-0.3
+0.0
-0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.1
-0.2
+0.3
+0.1
-0.1
phage
ICP3_phage_4.1_MOI_rep1
+0.1
+0.2
-0.4
+0.2
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.5
-0.1
+0.8
-0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.3
+0.0
+0.5
+0.2
-0.1
phage
ICP3_phage_411_MOI_rep1
-0.2
-0.1
+0.4
+0.4
-0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.1
-0.1
+0.5
+0.2
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.2
+0.1
+0.2
-0.1
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.2
+0.2
+0.2
-0.0
+0.1
phage
ICP3_phage_411_MOI_rep2
+0.2
+0.2
+0.2
+0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.2
+0.1
+0.2
+0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.3
+0.2
+0.0
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.4
+0.1
+0.0
-0.0
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.1
+0.2
+0.3
+0.2
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.2
+0.1
+0.4
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.4
+0.0
+0.1
+0.2
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.4
+0.1
+0.2
+0.1
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.3
+0.2
+0.3
+0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.4
+0.3
+0.1
+0.2
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.4
+0.3
-0.0
+0.2
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.5
+0.3
+0.1
+0.2
+0.4
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