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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00690 and CSW01_00695 are separated by 19 nucleotides
CSW01_00695 and CSW01_00700 are separated by 179 nucleotides
CSW01_00700 and CSW01_00705 are separated by 169 nucleotides
CSW01_00705 and CSW01_00710 are separated by 204 nucleotides
CSW01_00690: CSW01_00690 - homoserine/homoserine lactone efflux protein, at 130,749 to 131,366
_00690
CSW01_00695: CSW01_00695 - EAL domain-containing protein, at 131,386 to 132,612
_00695
CSW01_00700: CSW01_00700 - DNA starvation/stationary phase protection protein, at 132,792 to 133,262
_00700
CSW01_00705: CSW01_00705 - DUF2500 domain-containing protein, at 133,432 to 133,761
_00705
CSW01_00710: CSW01_00710 - DUF4145 domain-containing protein, at 133,966 to 134,334
_00710
Group
Condition
CSW01
_00690
CSW01
_00695
CSW01
_00700
CSW01
_00705
CSW01
_00710
phage
ICP3_phage_411_MOI_rep2
-0.2
-0.3
-0.1
+0.2
-1.4
phage
ICP1_phage_235.3_MOI_rep2
+0.2
-0.2
-0.6
+0.3
-1.1
phage
ICP1_phage_2.3_MOI_rep1
-0.2
-0.3
-0.5
-0.1
-0.2
phage
ICP1_phage_23.5_MOI_rep1
-0.2
-0.5
-0.2
-0.2
-0.0
phage
ICP3_phage_411_MOI_rep1
+0.0
+0.1
-0.4
+0.1
-0.8
phage
ICP3_phage_0.41_MOI_rep1
-0.4
-0.3
-0.2
+0.5
-0.3
phage
NoPhageControl
-0.1
-0.2
-0.0
-0.2
-0.2
phage
ICP1_phage_0.23_MOI_rep1
+0.2
-0.1
-0.3
-0.0
-0.4
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
-0.2
-0.1
+0.3
-0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.1
+0.0
-0.4
+0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.3
-0.1
-0.1
-0.0
+0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.2
-0.1
-0.2
+0.1
-0.0
phage
ICP1_phage_23.5_MOI_rep2
-0.1
+0.1
-0.0
+0.1
-0.4
phage
ICP3_phage_41.1_MOI_rep1
-0.0
-0.1
-0.5
+0.1
+0.3
phage
ICP1_phage_2.3_MOI_rep2
+0.0
-0.2
-0.2
+0.3
-0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.0
-0.1
-0.3
+0.2
+0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.1
-0.1
-0.3
+0.6
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.2
+0.2
-0.1
+0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.0
+0.2
-0.0
-0.1
+0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.4
+0.0
-0.2
+0.4
+0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.1
+0.0
+0.2
+0.3
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
+0.1
-0.0
+0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
+0.2
-0.1
+0.3
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.1
+0.2
-0.1
+0.2
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
+0.0
+0.1
+0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.3
+0.2
+0.0
+0.3
-0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.2
-0.1
-0.1
+0.1
+0.5
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.1
+0.0
+0.1
+0.3
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.1
+0.3
+0.1
+0.2
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.3
+0.2
+0.2
+0.4
-0.1
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