Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_00635 and CSW01_00640 are separated by 11 nucleotidesCSW01_00640 and CSW01_00645 are separated by 13 nucleotidesCSW01_00645 and CSW01_00650 overlap by 32 nucleotidesCSW01_00650 and CSW01_00655 are separated by 2 nucleotides CSW01_00635: CSW01_00635 - diaminopimelate decarboxylase, at 119,230 to 120,483 _00635 CSW01_00640: CSW01_00640 - diaminopimelate epimerase, at 120,495 to 121,325 _00640 CSW01_00645: CSW01_00645 - DUF484 domain-containing protein, at 121,339 to 122,037 _00645 CSW01_00650: CSW01_00650 - tyrosine recombinase XerC, at 122,006 to 122,941 _00650 CSW01_00655: CSW01_00655 - 2-haloalkanoic acid dehalogenase, at 122,944 to 123,663 _00655
Group Condition CSW01_00635 CSW01_00640 CSW01_00645 CSW01_00650 CSW01_00655
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B -0.1 N.D. -0.1 -4.3 +0.1
lb_anaerobic LB_Anaerobic_18HR_ZN20A -0.0 N.D. +0.0 -4.1 +0.1
lb_aerobic LB_Aerobic_18HR_ZN18B -0.5 N.D. -0.0 -2.7 +0.1
lb_anaerobic LB_Anaerobic_180MIN_ZN16A +0.0 N.D. -0.0 -2.6 -0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A -0.5 N.D. +0.1 -2.0 -0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.0 N.D. -0.2 -2.2 -0.1
phage NoPhageControl -0.1 N.D. -0.2 -1.9 -0.0
phage NoPhageControl -0.2 N.D. +0.0 -2.0 +0.0
phage ICP1_phage_235.3_MOI_rep1 -0.2 N.D. -0.3 -1.3 -0.1
phage ICP3_phage_4.1_MOI_rep2 +0.0 N.D. +0.1 -1.5 -0.4
phage ICP3_phage_41.1_MOI_rep1 -0.0 N.D. +0.2 -1.5 -0.4
phage ICP1_phage_0.23_MOI_rep2 -0.2 N.D. -0.0 -1.2 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A -0.0 N.D. +0.1 -1.6 -0.0
phage ICP1_phage_0.23_MOI_rep1 -0.1 N.D. -0.1 -0.8 -0.5
phage ICP3_phage_411_MOI_rep1 -0.0 N.D. +0.1 -1.5 -0.2
lb_aerobic LB_Aerobic_18HR_ZN18A +0.1 N.D. -0.1 -1.6 +0.0
phage ICP3_phage_0.41_MOI_rep2 +0.1 N.D. -0.2 -1.2 -0.1
phage ICP3_phage_4.1_MOI_rep1 +0.2 N.D. -0.2 -1.2 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.1 N.D. +0.2 -1.7 +0.1
lb_aerobic LB_Aerobic_180MIN_ZN14B +0.1 N.D. -0.1 -1.3 -0.0
phage ICP3_phage_411_MOI_rep2 +0.1 N.D. -0.2 -1.0 -0.2
phage ICP1_phage_23.5_MOI_rep1 +0.0 N.D. +0.1 -1.2 -0.2
phage ICP3_phage_0.41_MOI_rep1 -0.0 N.D. +0.3 -1.6 +0.1
lb_aerobic LB_Aerobic_180MIN_ZN14A -0.1 N.D. +0.0 -1.1 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B -0.1 N.D. +0.1 -1.0 -0.1
phage ICP3_phage_41.1_MOI_rep2 -0.1 N.D. +0.2 -0.9 -0.3
phage ICP1_phage_2.3_MOI_rep2 -0.0 N.D. +0.2 -1.1 +0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.2 N.D. -0.0 -1.0 -0.2
phage ICP1_phage_23.5_MOI_rep2 +0.1 N.D. +0.1 -1.0 -0.1
phage ICP1_phage_2.3_MOI_rep1 -0.1 N.D. +0.4 -0.8 -0.1
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