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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00570 and CSW01_00575 are separated by 171 nucleotides
CSW01_00575 and CSW01_00580 overlap by 1 nucleotides
CSW01_00580 and CSW01_00585 are separated by 6 nucleotides
CSW01_00585 and CSW01_00590 are separated by 138 nucleotides
CSW01_00570: CSW01_00570 - cytochrome c4, at 107,464 to 108,081
_00570
CSW01_00575: CSW01_00575 - class I SAM-dependent methyltransferase, at 108,253 to 108,921
_00575
CSW01_00580: CSW01_00580 - GTPase-activating protein, at 108,921 to 109,469
_00580
CSW01_00585: CSW01_00585 - DUF2489 domain-containing protein, at 109,476 to 109,967
_00585
CSW01_00590: CSW01_00590 - oxygen-independent coproporphyrinogen III oxidase, at 110,106 to 111,494
_00590
Group
Condition
CSW01
_00570
CSW01
_00575
CSW01
_00580
CSW01
_00585
CSW01
_00590
phage
ICP1_phage_235.3_MOI_rep2
-1.3
-0.2
-0.2
-0.2
-0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.6
-0.7
+0.1
-0.2
-0.6
phage
ICP3_phage_41.1_MOI_rep2
-0.9
-0.4
-0.1
-0.0
-0.5
phage
ICP3_phage_411_MOI_rep2
-0.3
-0.5
-0.3
-0.2
-0.5
phage
ICP3_phage_4.1_MOI_rep2
-1.0
-0.4
+0.2
-0.1
-0.5
phage
ICP1_phage_23.5_MOI_rep1
-0.6
-0.3
-0.2
-0.3
-0.4
phage
ICP1_phage_0.23_MOI_rep1
-0.9
+0.0
+0.1
-0.6
-0.3
phage
ICP3_phage_41.1_MOI_rep1
-0.5
-0.3
+0.1
-0.3
-0.7
phage
ICP1_phage_235.3_MOI_rep1
+0.1
-0.3
-0.4
-0.6
-0.5
phage
ICP3_phage_0.41_MOI_rep1
-0.4
-0.6
+0.3
-0.4
-0.3
phage
ICP1_phage_2.3_MOI_rep2
-0.2
-0.2
-0.0
-0.3
-0.5
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.3
-0.4
-0.0
-0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.3
-0.0
+0.2
-0.4
-0.5
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.1
-0.1
-0.3
-0.2
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.8
+0.0
+0.1
-0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.2
+0.1
-0.2
-0.3
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.7
+0.1
+0.0
-0.1
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.0
-0.1
-0.2
-0.3
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.6
+0.1
-0.0
-0.0
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.2
-0.1
+0.1
-0.4
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.5
+0.0
+0.2
-0.2
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.3
-0.0
+0.1
-0.4
-0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.0
-0.2
+0.2
-0.1
-0.4
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.3
+0.1
-0.1
-0.1
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.2
-0.1
-0.4
+0.2
-0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
-0.0
-0.4
+0.1
-0.3
phage
ICP3_phage_411_MOI_rep1
-0.2
-0.2
+0.4
-0.2
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
+0.0
+0.1
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
-0.0
+0.2
+0.1
-0.6
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.4
+0.2
+0.1
-0.0
-0.1
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