Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_00475 and CSW01_00480 are separated by 105 nucleotidesCSW01_00480 and CSW01_00485 are separated by 70 nucleotidesCSW01_00485 and CSW01_00490 are separated by 27 nucleotidesCSW01_00490 and CSW01_00495 overlap by 38 nucleotides CSW01_00475: CSW01_00475 - cytochrome C biogenesis protein CcsA, at 86,575 to 87,576 _00475 CSW01_00480: CSW01_00480 - MATE family efflux transporter, at 87,682 to 89,046 _00480 CSW01_00485: CSW01_00485 - class I SAM-dependent methyltransferase, at 89,117 to 89,986 _00485 CSW01_00490: CSW01_00490 - repressor LexA, at 90,014 to 90,643 _00490 CSW01_00495: CSW01_00495 - SOS-response transcriptional repressor, at 90,606 to 90,794 _00495
Group Condition CSW01_00475 CSW01_00480 CSW01_00485 CSW01_00490 CSW01_00495
phage ICP1_phage_23.5_MOI_rep2 -0.2 -0.1 +0.4 N.D. -1.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A +0.1 -0.0 -0.2 N.D. -1.5
phage ICP1_phage_235.3_MOI_rep2 -0.1 +0.1 -0.1 N.D. -1.0
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.1 -0.1 -0.1 N.D. -1.0
phage ICP3_phage_4.1_MOI_rep1 +0.0 -0.1 -0.0 N.D. -1.0
phage ICP3_phage_0.41_MOI_rep1 -0.2 -0.1 +0.0 N.D. -0.6
lb_aerobic LB_Aerobic_18HR_ZN18A +0.3 -0.0 -0.2 N.D. -0.7
phage ICP1_phage_0.23_MOI_rep2 -0.2 +0.0 -0.2 N.D. -0.3
phage ICP1_phage_2.3_MOI_rep2 -0.1 +0.1 +0.1 N.D. -0.7
lb_anaerobic LB_Anaerobic_180MIN_ZN16A +0.2 -0.0 +0.0 N.D. -0.8
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.1 -0.0 -0.1 N.D. -0.6
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A +0.1 +0.0 -0.2 N.D. -0.5
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.3 +0.0 -0.1 N.D. -0.7
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.3 -0.1 -0.1 N.D. -0.5
phage ICP3_phage_41.1_MOI_rep1 -0.3 -0.2 +0.1 N.D. -0.0
phage ICP3_phage_411_MOI_rep2 -0.3 -0.2 -0.3 N.D. +0.5
lb_aerobic LB_Aerobic_60MIN_ZN2B +0.2 -0.0 -0.2 N.D. -0.3
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13B +0.2 -0.1 +0.0 N.D. -0.4
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.1 +0.1 -0.1 N.D. -0.3
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.3 +0.1 -0.2 N.D. -0.4
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A +0.2 +0.0 -0.1 N.D. -0.3
phage ICP1_phage_23.5_MOI_rep1 +0.1 +0.1 -0.4 N.D. +0.4
phage ICP3_phage_0.41_MOI_rep2 +0.1 +0.1 -0.4 N.D. +0.5
lb_anaerobic LB_Anaerobic_18HR_ZN20A +0.3 +0.1 +0.1 N.D. -0.2
phage ICP1_phage_235.3_MOI_rep1 -0.3 -0.2 +0.2 N.D. +0.8
phage ICP1_phage_2.3_MOI_rep1 -0.2 -0.1 +0.2 N.D. +0.7
lb_aerobic LB_Aerobic_18HR_ZN18B +0.1 +0.0 +0.0 N.D. +0.5
phage NoPhageControl +0.1 +0.2 +0.1 N.D. +0.5
phage ICP3_phage_411_MOI_rep1 -0.3 +0.1 +0.3 N.D. +0.9
phage ICP1_phage_0.23_MOI_rep1 +0.1 -0.0 -0.0 N.D. +1.2
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