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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00385 and CSW01_00390 are separated by 75 nucleotides
CSW01_00390 and CSW01_00395 are separated by 59 nucleotides
CSW01_00395 and CSW01_00400 are separated by 117 nucleotides
CSW01_00400 and CSW01_00405 are separated by 95 nucleotides
CSW01_00385: CSW01_00385 - transcriptional regulator AsnC, at 70,976 to 71,437
_00385
CSW01_00390: CSW01_00390 - GGDEF domain-containing protein, at 71,513 to 73,819
_00390
CSW01_00395: CSW01_00395 - ribosomal RNA small subunit methyltransferase J, at 73,879 to 74,664
_00395
CSW01_00400: CSW01_00400 - hypothetical protein, at 74,782 to 75,171
_00400
CSW01_00405: CSW01_00405 - EamA family transporter, at 75,267 to 76,154
_00405
Group
Condition
CSW01
_00385
CSW01
_00390
CSW01
_00395
CSW01
_00400
CSW01
_00405
phage
ICP1_phage_0.23_MOI_rep2
-0.8
-0.1
-0.2
-0.3
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.4
-0.0
-0.2
-0.3
+0.0
phage
ICP3_phage_4.1_MOI_rep2
-0.3
+0.2
-0.2
-0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
+0.1
-0.0
-0.5
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.4
-0.0
-0.0
-0.2
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.2
+0.0
-0.2
-0.1
-0.2
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.4
+0.0
-0.2
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.0
-0.1
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
+0.1
-0.0
-0.5
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.3
+0.1
-0.0
-0.3
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.3
+0.0
-0.1
-0.1
-0.1
phage
ICP1_phage_235.3_MOI_rep1
+0.1
-0.1
-0.2
-0.3
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.1
+0.0
-0.3
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.2
-0.1
-0.1
+0.1
-0.0
phage
ICP1_phage_23.5_MOI_rep2
-0.4
-0.0
-0.2
+0.5
-0.1
phage
ICP3_phage_411_MOI_rep1
+0.1
-0.1
-0.2
+0.0
-0.1
phage
NoPhageControl
+0.3
-0.0
-0.1
-0.3
-0.1
phage
ICP3_phage_411_MOI_rep2
-0.3
-0.1
-0.1
+0.5
-0.1
phage
ICP1_phage_235.3_MOI_rep2
-0.2
-0.1
-0.2
+0.2
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.1
-0.2
-0.2
+0.5
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.3
+0.1
+0.0
+0.2
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.3
+0.0
-0.1
+0.1
-0.3
phage
ICP3_phage_4.1_MOI_rep1
-0.1
+0.0
-0.2
+0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.3
+0.0
+0.1
+0.2
+0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.3
-0.0
-0.1
+0.6
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.1
-0.0
-0.1
+0.4
+0.0
phage
ICP3_phage_0.41_MOI_rep2
-0.2
+0.1
-0.1
+0.4
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
+0.2
+0.1
+0.3
+0.0
phage
ICP1_phage_0.23_MOI_rep1
+0.2
+0.1
-0.2
+0.8
-0.0
phage
ICP1_phage_23.5_MOI_rep1
+0.5
-0.1
-0.1
+0.4
+0.2
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