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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00360 and CSW01_00365 are separated by 224 nucleotides
CSW01_00365 and CSW01_00370 are separated by 132 nucleotides
CSW01_00370 and CSW01_00375 are separated by 62 nucleotides
CSW01_00375 and CSW01_00380 are separated by 103 nucleotides
CSW01_00360: CSW01_00360 - 2-iminoacetate synthase ThiH, at 64,988 to 66,100
_00360
CSW01_00365: CSW01_00365 - aminopeptidase P family protein, at 66,325 to 68,118
_00365
CSW01_00370: CSW01_00370 - LysR family transcriptional regulator, at 68,251 to 69,234
_00370
CSW01_00375: CSW01_00375 - Bcr/CflA family drug resistance efflux transporter, at 69,297 to 70,499
_00375
CSW01_00380: CSW01_00380 - hypothetical protein, at 70,603 to 70,887
_00380
Group
Condition
CSW01
_00360
CSW01
_00365
CSW01
_00370
CSW01
_00375
CSW01
_00380
phage
ICP3_phage_411_MOI_rep2
-0.2
-0.1
-0.1
+0.1
-5.5
phage
ICP1_phage_23.5_MOI_rep1
+0.2
-0.2
-0.1
+0.1
-5.5
phage
ICP1_phage_0.23_MOI_rep1
+0.1
-0.2
+0.1
-0.1
-5.3
phage
ICP3_phage_411_MOI_rep1
+0.2
-0.0
+0.1
-0.0
-5.4
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
-0.1
-0.0
-2.1
phage
ICP1_phage_23.5_MOI_rep2
+0.0
-0.2
+0.0
-0.1
-1.9
phage
ICP1_phage_0.23_MOI_rep2
-0.1
+0.1
-0.1
+0.0
-1.7
phage
ICP1_phage_2.3_MOI_rep2
-0.2
-0.1
+0.1
+0.0
-1.5
phage
NoPhageControl
-0.1
+0.0
-0.0
+0.0
-0.8
phage
ICP3_phage_4.1_MOI_rep2
+0.1
-0.0
+0.2
+0.0
-1.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.0
-0.0
-0.0
+0.0
-0.8
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.0
+0.1
-0.0
-0.7
phage
ICP3_phage_0.41_MOI_rep2
+0.2
-0.2
+0.0
-0.2
-0.4
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
-0.0
-0.0
-0.1
-0.5
phage
ICP3_phage_41.1_MOI_rep1
-0.1
-0.3
-0.0
-0.0
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.0
-0.1
+0.2
+0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.0
+0.1
+0.1
+0.0
-0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.2
-0.0
+0.1
-0.1
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.0
+0.1
+0.1
-0.0
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.1
-0.0
+0.2
-0.0
+0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.1
-0.2
+0.0
+0.0
+0.5
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
+0.1
+0.0
-0.1
+0.5
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
-0.1
+0.0
-0.0
+0.6
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.0
+0.0
+0.1
+0.0
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
-0.0
+0.0
-0.1
+0.7
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.1
+0.0
+0.1
-0.0
+0.7
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
+0.0
+0.1
-0.1
+0.6
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.2
-0.1
+0.2
+0.1
+0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.0
-0.0
+0.1
-0.1
+1.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.2
+0.1
+0.0
-0.0
+1.0
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