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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00355 and CSW01_00360 overlap by 4 nucleotides
CSW01_00360 and CSW01_00365 are separated by 224 nucleotides
CSW01_00365 and CSW01_00370 are separated by 132 nucleotides
CSW01_00370 and CSW01_00375 are separated by 62 nucleotides
CSW01_00355: CSW01_00355 - thiazole synthase, at 64,221 to 64,991
_00355
CSW01_00360: CSW01_00360 - 2-iminoacetate synthase ThiH, at 64,988 to 66,100
_00360
CSW01_00365: CSW01_00365 - aminopeptidase P family protein, at 66,325 to 68,118
_00365
CSW01_00370: CSW01_00370 - LysR family transcriptional regulator, at 68,251 to 69,234
_00370
CSW01_00375: CSW01_00375 - Bcr/CflA family drug resistance efflux transporter, at 69,297 to 70,499
_00375
Group
Condition
CSW01
_00355
CSW01
_00360
CSW01
_00365
CSW01
_00370
CSW01
_00375
phage
ICP3_phage_41.1_MOI_rep1
-0.0
-0.1
-0.3
-0.0
-0.0
phage
ICP3_phage_411_MOI_rep2
-0.0
-0.2
-0.1
-0.1
+0.1
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.2
-0.2
+0.0
-0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
-0.0
+0.0
-0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
+0.1
-0.0
+0.0
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.2
+0.0
+0.0
-0.0
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
-0.0
-0.0
+0.1
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.2
-0.1
+0.1
+0.0
phage
ICP1_phage_23.5_MOI_rep2
+0.1
+0.0
-0.2
+0.0
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.0
-0.1
+0.1
-0.1
+0.0
phage
ICP1_phage_23.5_MOI_rep1
+0.1
+0.2
-0.2
-0.1
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.1
+0.0
-0.0
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
+0.1
+0.1
+0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
+0.1
-0.1
+0.0
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
+0.1
+0.0
+0.0
-0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.0
+0.1
-0.2
+0.0
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
+0.1
-0.1
+0.0
-0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.2
-0.1
-0.1
-0.1
-0.0
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.0
+0.0
+0.0
-0.1
phage
ICP3_phage_411_MOI_rep1
-0.1
+0.2
-0.0
+0.1
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.0
+0.0
-0.1
+0.2
+0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
+0.1
-0.0
+0.2
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.1
+0.1
+0.0
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
+0.2
+0.1
+0.0
-0.0
phage
ICP3_phage_4.1_MOI_rep2
-0.2
+0.1
-0.0
+0.2
+0.0
phage
ICP1_phage_0.23_MOI_rep1
+0.3
+0.1
-0.2
+0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.0
+0.1
+0.0
+0.1
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.0
+0.0
+0.1
+0.1
+0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.2
+0.2
-0.0
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.0
+0.2
-0.1
+0.2
+0.1
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