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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00330 and CSW01_00335 are separated by 251 nucleotides
CSW01_00335 and CSW01_00340 are separated by 3 nucleotides
CSW01_00340 and CSW01_00345 overlap by 14 nucleotides
CSW01_00345 and CSW01_00350 overlap by 40 nucleotides
CSW01_00330: CSW01_00330 - fluoride efflux transporter CrcB, at 59,357 to 59,737
_00330
CSW01_00335: CSW01_00335 - phosphomethylpyrimidine synthase, at 59,989 to 61,926
_00335
CSW01_00340: CSW01_00340 - thiamine phosphate synthase, at 61,930 to 63,252
_00340
CSW01_00345: CSW01_00345 - thiazole biosynthesis adenylyltransferase ThiF, at 63,239 to 64,015
_00345
CSW01_00350: CSW01_00350 - thiamine biosynthesis protein ThiS, at 63,976 to 64,215
_00350
Group
Condition
CSW01
_00330
CSW01
_00335
CSW01
_00340
CSW01
_00345
CSW01
_00350
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.5
-0.1
-0.1
-0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.7
+0.1
-0.3
-0.1
+0.3
phage
ICP3_phage_0.41_MOI_rep1
-0.4
+0.1
-0.1
-0.2
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.3
+0.2
-0.0
-0.2
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.6
-0.0
+0.0
-0.0
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.6
+0.0
+0.1
+0.0
+0.1
phage
ICP3_phage_411_MOI_rep1
-0.2
+0.2
-0.0
-0.1
-0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.5
-0.0
-0.3
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.4
+0.0
-0.0
+0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.3
-0.0
-0.1
+0.1
+0.0
phage
ICP1_phage_0.23_MOI_rep1
-0.7
+0.1
+0.0
+0.1
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.4
-0.0
+0.1
+0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.3
+0.0
+0.1
-0.0
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
-0.0
+0.0
+0.1
+0.2
phage
ICP1_phage_23.5_MOI_rep1
+0.1
+0.0
-0.0
-0.3
+0.2
phage
ICP1_phage_2.3_MOI_rep2
+0.3
+0.0
-0.1
-0.2
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.2
+0.0
+0.0
+0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.3
+0.0
+0.1
+0.1
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.4
+0.0
+0.1
+0.1
+0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.2
+0.2
-0.1
+0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.1
+0.1
+0.1
+0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.7
-0.2
-0.2
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.3
+0.2
+0.1
+0.1
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.2
+0.1
+0.1
+0.1
+0.3
phage
ICP1_phage_2.3_MOI_rep1
-0.1
+0.1
+0.1
-0.1
+0.5
phage
ICP3_phage_411_MOI_rep2
+0.6
+0.1
-0.2
-0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.3
+0.1
+0.0
+0.0
+0.1
phage
NoPhageControl
+0.4
+0.1
+0.1
+0.0
+0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.4
+0.2
-0.0
-0.0
+0.5
phage
ICP1_phage_235.3_MOI_rep2
+0.7
+0.1
-0.2
-0.1
+1.0
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