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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00205 and CSW01_00210 are separated by 38 nucleotides
CSW01_00210 and CSW01_00215 overlap by 88 nucleotides
CSW01_00215 and CSW01_00220 are separated by 11 nucleotides
CSW01_00220 and CSW01_00225 are separated by 61 nucleotides
CSW01_00205: CSW01_00205 - hemolysin III family protein, at 37,848 to 38,495
_00205
CSW01_00210: CSW01_00210 - DUF3157 domain-containing protein, at 38,534 to 39,190
_00210
CSW01_00215: CSW01_00215 - potassium uptake protein TrkH, at 39,103 to 40,548
_00215
CSW01_00220: CSW01_00220 - Trk system potassium transporter TrkA, at 40,560 to 41,936
_00220
CSW01_00225: CSW01_00225 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 41,998 to 43,278
_00225
Group
Condition
CSW01
_00205
CSW01
_00210
CSW01
_00215
CSW01
_00220
CSW01
_00225
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.1
+0.0
-0.5
N.D.
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.0
+0.0
-0.5
N.D.
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
+0.1
-0.3
N.D.
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.0
+0.2
-0.2
N.D.
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
+0.2
-0.2
N.D.
-0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
+0.2
-0.2
N.D.
-0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
+0.2
-0.3
N.D.
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
+0.1
-0.2
N.D.
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.0
+0.2
-0.1
N.D.
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
+0.1
-0.2
N.D.
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.0
+0.3
-0.1
N.D.
-0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.0
+0.2
-0.1
N.D.
+0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.2
+0.3
+0.0
N.D.
-0.0
phage
ICP1_phage_0.23_MOI_rep1
+0.0
-0.6
+1.1
N.D.
-0.0
phage
ICP3_phage_41.1_MOI_rep1
-0.1
-0.3
+1.0
N.D.
-0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
+0.3
+0.1
N.D.
+0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.2
-0.3
+1.0
N.D.
-0.1
phage
ICP3_phage_411_MOI_rep1
+0.0
-0.1
+1.0
N.D.
-0.1
phage
ICP3_phage_411_MOI_rep2
-0.1
-0.0
+1.1
N.D.
-0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.0
-0.3
+0.9
N.D.
+0.2
phage
ICP3_phage_0.41_MOI_rep1
-0.0
+0.0
+1.0
N.D.
-0.1
phage
ICP1_phage_2.3_MOI_rep1
+0.1
-0.2
+1.0
N.D.
-0.0
phage
ICP3_phage_41.1_MOI_rep2
+0.3
-0.3
+0.9
N.D.
+0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.0
-0.2
+1.2
N.D.
-0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.1
-0.0
+1.1
N.D.
-0.0
phage
ICP1_phage_235.3_MOI_rep1
+0.1
-0.0
+0.9
N.D.
-0.0
phage
ICP1_phage_0.23_MOI_rep2
+0.2
-0.3
+1.1
N.D.
+0.1
phage
ICP1_phage_23.5_MOI_rep1
+0.2
-0.0
+0.9
N.D.
+0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.0
+0.2
+1.1
N.D.
+0.0
phage
ICP3_phage_4.1_MOI_rep2
+0.2
+0.1
+1.1
N.D.
+0.2
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