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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00135 and CSW01_00140 are separated by 3 nucleotides
CSW01_00140 and CSW01_00145 are separated by 9 nucleotides
CSW01_00145 and CSW01_00150 overlap by 10 nucleotides
CSW01_00150 and CSW01_00155 are separated by 11 nucleotides
CSW01_00135: CSW01_00135 - threonine ammonia-lyase, biosynthetic, at 23,256 to 24,788
_00135
CSW01_00140: CSW01_00140 - dihydroxy-acid dehydratase, at 24,792 to 26,633
_00140
CSW01_00145: CSW01_00145 - branched-chain-amino-acid transaminase, at 26,643 to 27,602
_00145
CSW01_00150: CSW01_00150 - acetolactate synthase 2 small subunit, at 27,593 to 27,877
_00150
CSW01_00155: CSW01_00155 - acetolactate synthase 2 catalytic subunit, at 27,889 to 29,535
_00155
Group
Condition
CSW01
_00135
CSW01
_00140
CSW01
_00145
CSW01
_00150
CSW01
_00155
phage
ICP3_phage_41.1_MOI_rep1
-0.1
+0.1
-0.0
-0.4
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
-0.0
-0.2
-0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.0
-0.0
-0.1
-0.3
-0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.1
-0.1
+0.1
-0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.1
-0.2
-0.4
+0.2
-0.0
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+0.1
+0.2
-0.4
+0.0
phage
ICP1_phage_23.5_MOI_rep1
+0.0
+0.0
+0.1
-0.1
-0.2
phage
ICP3_phage_411_MOI_rep2
-0.3
+0.2
+0.2
-0.0
-0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.2
+0.1
+0.1
-0.2
+0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.3
-0.1
-0.1
+0.5
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.0
-0.0
+0.2
-0.2
-0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.1
+0.0
+0.2
-0.0
+0.0
phage
ICP3_phage_41.1_MOI_rep2
-0.2
+0.3
+0.1
+0.1
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.1
-0.1
+0.1
-0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
+0.0
+0.2
-0.0
+0.0
phage
NoPhageControl
-0.0
+0.1
-0.1
+0.2
+0.1
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.0
+0.2
-0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.0
-0.0
+0.2
+0.2
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.0
+0.0
+0.1
+0.1
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
+0.0
+0.2
-0.0
+0.1
phage
ICP3_phage_411_MOI_rep1
+0.0
-0.0
-0.0
+0.4
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.0
+0.1
+0.1
+0.2
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.0
+0.0
+0.2
+0.2
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
+0.1
+0.1
+0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
+0.1
+0.1
+0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.1
+0.0
+0.3
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.2
+0.1
+0.1
+0.1
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.2
+0.1
+0.2
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.2
+0.1
+0.1
+0.2
+0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.1
+0.3
+0.3
-0.1
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