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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_00080 and CSW01_00085 are separated by 275 nucleotides
CSW01_00085 and CSW01_00090 are separated by 87 nucleotides
CSW01_00090 and CSW01_00095 are separated by 188 nucleotides
CSW01_00095 and CSW01_00100 overlap by 59 nucleotides
CSW01_00080: CSW01_00080 - hypothetical protein, at 14,377 to 14,493
_00080
CSW01_00085: CSW01_00085 - heat-shock protein Hsp20, at 14,769 to 15,206
_00085
CSW01_00090: CSW01_00090 - valine--pyruvate transaminase, at 15,294 to 16,550
_00090
CSW01_00095: CSW01_00095 - hypothetical protein, at 16,739 to 16,927
_00095
CSW01_00100: CSW01_00100 - glycine--tRNA ligase subunit beta, at 16,869 to 18,935
_00100
Group
Condition
CSW01
_00080
CSW01
_00085
CSW01
_00090
CSW01
_00095
CSW01
_00100
phage
ICP1_phage_235.3_MOI_rep2
-1.3
-0.2
-0.2
-2.0
N.D.
phage
ICP1_phage_2.3_MOI_rep1
-1.1
-0.4
+0.2
-1.9
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.8
+0.2
+0.0
-2.1
N.D.
phage
ICP3_phage_41.1_MOI_rep2
-1.0
+0.2
+0.0
-1.9
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.4
-0.2
-0.1
-1.9
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.3
-0.1
+0.2
-2.4
N.D.
phage
ICP3_phage_4.1_MOI_rep1
-0.2
+0.1
+0.1
-2.1
N.D.
phage
ICP3_phage_4.1_MOI_rep2
-0.2
-0.7
-0.2
-0.9
N.D.
phage
ICP3_phage_0.41_MOI_rep1
-0.4
-1.3
+0.0
-0.2
N.D.
phage
ICP3_phage_411_MOI_rep1
+0.2
-0.3
+0.2
-2.0
N.D.
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.4
-0.1
-1.9
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.4
-0.6
-0.0
-1.4
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
-0.2
-0.0
-1.3
N.D.
phage
ICP3_phage_41.1_MOI_rep1
+1.3
-0.7
+0.1
-2.2
N.D.
phage
ICP1_phage_0.23_MOI_rep1
-0.3
+0.0
+0.1
-1.2
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.3
-0.7
-0.1
-0.4
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.2
-0.4
+0.1
-0.6
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.0
-0.2
-0.0
-0.8
N.D.
phage
ICP1_phage_235.3_MOI_rep1
-1.0
+0.1
+0.0
-0.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.5
-0.3
+0.1
-0.3
N.D.
phage
NoPhageControl
+0.2
-0.0
+0.1
-1.2
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
-0.3
-0.0
-0.7
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.2
-0.2
+0.0
-0.8
N.D.
phage
ICP1_phage_2.3_MOI_rep2
-0.1
+0.3
+0.3
-1.3
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.2
-0.5
-0.1
-0.4
N.D.
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.3
-0.8
-0.0
-0.2
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.2
-0.2
+0.2
-0.9
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.4
-0.0
+0.0
-0.9
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.6
-0.1
+0.1
-1.0
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.5
-0.1
-0.1
-0.5
N.D.
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