Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS27710 and BWI76_RS27715 are separated by 24 nucleotidesBWI76_RS27715 and BWI76_RS27720 are separated by 249 nucleotidesBWI76_RS27720 and BWI76_RS27725 are separated by 3 nucleotidesBWI76_RS27725 and BWI76_RS27730 overlap by 1 nucleotides BWI76_RS27710: BWI76_RS27710 - N-acetylmuramic acid 6-phosphate etherase, at 5,751,207 to 5,752,109 _RS27710 BWI76_RS27715: BWI76_RS27715 - PTS N-acetylmuramic acid transporter subunits IIBC, at 5,752,134 to 5,753,567 _RS27715 BWI76_RS27720: BWI76_RS27720 - carboxylate/amino acid/amine transporter, at 5,753,817 to 5,754,719 _RS27720 BWI76_RS27725: BWI76_RS27725 - hypothetical protein, at 5,754,723 to 5,754,980 _RS27725 BWI76_RS27730: BWI76_RS27730 - ISNCY family transposase, at 5,754,980 to 5,755,933 _RS27730
Group Condition BWI76_RS27710 BWI76_RS27715 BWI76_RS27720 BWI76_RS27725 BWI76_RS27730
nitrogen source L-Arginine (N) -0.6 -0.4 -0.6 N.D. -0.1
carbon source D-Lactate (C) -1.2 -0.1 -0.1 N.D. -0.2
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.9 -0.4 -0.3 N.D. +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.2 +0.2 -0.3 N.D. -0.2
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -1.9 +0.2 +0.3 N.D. -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -0.3 -0.6 N.D. +0.0
carbon source 2-Deoxyadenosine 4 mM (C) -0.4 -0.4 -0.7 N.D. +0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 -0.5 -0.3 N.D. +0.0
carbon source D-Glucosamine Hydrochloride (C) -1.0 -0.0 -0.2 N.D. -0.1
rhizosphere rhizosphere sample 1; outgrowth in LB -1.2 -0.2 -0.2 N.D. +0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 +0.1 -0.4 N.D. -0.7
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 -0.2 -0.3 N.D. -0.2
carbon source D-Alanine (C) -0.5 -0.4 +0.3 N.D. -0.5
stress Cobalt chloride 0.5 mM -0.4 -0.6 -0.1 N.D. +0.1
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL +0.0 +0.1 -0.6 N.D. -0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.2 +0.4 -0.5 N.D. -0.5
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.7 +0.2 -0.2 N.D. +0.1
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.7 -0.1 -0.2 N.D. +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 +0.1 -0.3 N.D. +0.3
carbon source Inosine (C) -0.7 +0.3 +0.1 N.D. -0.2
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days -0.4 -0.4 +0.5 N.D. -0.0
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x -0.3 +0.2 +0.3 N.D. -0.4
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.6 +0.2 +0.5 N.D. +0.0
phage KLEB31 MOI 1 -0.5 +0.2 +0.3 N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 -0.4 +0.8 N.D. +0.2
phage K. M5a1 KLEB26 MOI 0.1 +0.3 +0.4 -0.2 N.D. +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.8 -0.0 +0.1 N.D. +0.2
phage KLEB29 MOI 1 +0.1 +0.4 +0.5 N.D. +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.0 +0.1 N.D. +1.2
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.7 +0.3 +0.2 N.D. +0.7
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