Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS27365 and BWI76_RS27370 are separated by 175 nucleotidesBWI76_RS27370 and BWI76_RS27375 overlap by 23 nucleotidesBWI76_RS27375 and BWI76_RS27380 are separated by 174 nucleotidesBWI76_RS27380 and BWI76_RS27385 are separated by 124 nucleotides BWI76_RS27365: BWI76_RS27365 - hypothetical protein, at 5,679,015 to 5,679,680 _RS27365 BWI76_RS27370: BWI76_RS27370 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase, at 5,679,856 to 5,681,067 _RS27370 BWI76_RS27375: BWI76_RS27375 - deoxyuridine 5'-triphosphate nucleotidohydrolase, at 5,681,045 to 5,681,503 _RS27375 BWI76_RS27380: BWI76_RS27380 - nucleoid occlusion factor SlmA, at 5,681,678 to 5,682,274 _RS27380 BWI76_RS27385: BWI76_RS27385 - orotate phosphoribosyltransferase, at 5,682,399 to 5,683,040 _RS27385
Group Condition BWI76_RS27365 BWI76_RS27370 BWI76_RS27375 BWI76_RS27380 BWI76_RS27385
supernatant control Vogels_fungal_media; pH 5.5 -0.2 N.D. N.D. -0.2 -7.8
carbon source RCH2_defined_glucose with MS_media 0.5x -0.3 N.D. N.D. +0.2 -8.0
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.7 N.D. N.D. +0.0 -7.3
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x -0.0 N.D. N.D. +0.0 -7.9
nitrogen source N-Acetyl-D-glucosamine (N) -0.1 N.D. N.D. -0.5 -7.3
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x +0.0 N.D. N.D. +0.0 -7.9
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x -0.6 N.D. N.D. -0.6 -6.5
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.2 N.D. N.D. -0.0 -7.5
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x -0.5 N.D. N.D. +0.2 -7.3
supernatant control Vogels_fungal_media; pH 5.5 +0.3 N.D. N.D. -0.1 -7.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.4 N.D. N.D. -0.2 -6.9
nitrogen source L-Cysteine (N) -0.3 N.D. N.D. +0.1 -7.3
carbon source Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM +0.1 N.D. N.D. +0.0 -7.6
nitrogen source L-Asparagine (N) -0.3 N.D. N.D. +0.1 -7.1
nitrogen source D-Alanine (N) -0.6 N.D. N.D. -0.2 -6.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.2 N.D. N.D. -0.2 -7.4
carbon source Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM -0.2 N.D. N.D. -0.1 -7.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.2 N.D. N.D. +0.2 -7.3
nitrogen source L-Proline (N) -0.1 N.D. N.D. +0.0 -7.2
nitrogen source Urea (N) -0.1 N.D. N.D. -0.0 -7.1
supernatant control Vogels_fungal_media 0.1X -0.4 N.D. N.D. -0.2 -6.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.2 N.D. N.D. -0.2 -6.7
nitrogen source L-Arginine (N) +0.2 N.D. N.D. -1.0 -6.2
nitrogen source nitrate (N) -0.9 N.D. N.D. +0.3 -6.4
nitrogen source D-Alanine (N) -0.3 N.D. N.D. +0.2 -6.8
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.4 N.D. N.D. +0.2 -7.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM +0.2 N.D. N.D. -0.1 -6.8
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x +0.3 N.D. N.D. +0.1 -7.0
nitrogen source Casamino Acids (N) +0.2 N.D. N.D. +0.2 -6.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 83.25 mM +0.3 N.D. N.D. +0.1 -6.9
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