Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS27090	BWI76_RS27095	BWI76_RS27100	BWI76_RS27105	BWI76_RS27110
phage	K. M5a1 KLEB26 MOI 0.1	-0.8	-1.0	-1.1	-0.3	-1.3
phage	KLEB26 MOI0.1	-0.5	-0.2	-0.6	-0.5	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.3	-0.1	-0.6	-0.7
phage	KLEB25 MOI 1	-0.0	+0.0	-0.1	-0.4	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.1	-0.1	+0.2	-0.5	-0.3
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL	-0.1	-0.1	-0.1	+0.3	-0.7
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.3	-0.4	-0.2	+0.2	+0.2
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.1	-0.0	+0.5	-0.4	-0.5
phage	K. M5a1 KLEB23 MOI 10	-0.1	-0.1	-0.2	+0.4	-0.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM	-0.0	-0.1	+0.3	-0.6	+0.1
phage	KLEB15 MOI 10	+0.1	+0.0	+0.0	-0.9	+0.4
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.0	-0.4	+0.1	+0.4	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.2	+0.0	+0.0	+0.4	-0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.3	-0.2	-0.1	+0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	+0.3	+0.0	+0.3	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.1	-0.4	+0.8	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	-0.0	+0.3	-0.5	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.2	-0.1	+0.3	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.2	-0.2	+0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.2	-0.0	+0.7	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.0	-0.0	+1.0	-0.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.2	+0.0	+0.3	+0.6	+0.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.1	+0.2	+0.0	+0.5	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.0	+0.3	-0.3	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	+0.0	-0.1	+0.4	+0.8
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.1	+0.2	+0.3	+0.6	+0.1
nitrogen source	Gly-DL-Asp (N)	+0.1	+0.3	-0.1	+0.5	+0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.2	+0.3	+0.2	+0.2	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.0	+0.1	+0.8	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	+0.2	+0.3	+0.6	+0.7