Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS26695	BWI76_RS26700	BWI76_RS26705	BWI76_RS26710	BWI76_RS26715
nitrogen source	L-Arginine (N)	-0.4	-0.3	-0.5	+0.0	-0.0
phage	KLEB30 MOI 1	-0.2	+0.1	-0.4	-0.2	-0.1
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.8	-0.2	+0.3	-0.0	-0.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.6	-0.3	+0.2	-0.0	+0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.2	-0.6	+0.2	+0.0	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.5	+0.0	+0.2	-0.1	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.5	-0.3	+0.3	-0.0	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.7	+0.0	+0.2	-0.0	+0.0
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.7	+0.3	+0.2	+0.0	-0.1
nitrogen source	D-Serine (N)	+0.4	-0.1	-0.5	+0.1	-0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.3	+0.0	+0.4	-0.2	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	+0.2	+0.3	-0.7	+0.1	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.4	-0.4	-0.1	+0.2	+0.0
phage	KP2_E1_R2_1	+0.3	-0.1	-0.4	+0.1	+0.2
phage	Roth35v2	-0.2	+0.3	-0.3	+0.2	+0.2
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	-0.1	+0.6	+0.0	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.1	-0.1	+0.5	+0.1	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	+0.1	+0.4	+0.1	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6	-0.0	-0.2	+0.1	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.6	-0.4	+0.1	+0.2
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	-0.3	+0.1	+0.7	+0.0	+0.0
ecofab	LB in EcoFAB_10mL	+0.5	-0.3	+0.2	-0.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	+0.2	+0.5	+0.1	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	+0.5	-0.1	-0.1	+0.1
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.5	+0.5	+0.2	-0.1	-0.2
phage	MM16	+0.3	+0.2	+0.1	+0.3	+0.1
phage	Roth47	+0.5	+0.2	+0.2	-0.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	+0.2	+0.7	-0.1	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.4	+0.2	+0.1	+0.2
nitrogen source	Glucuronamide (N)	+0.4	+0.1	+0.6	+0.0	+0.0