Fitness for 5 genes in Klebsiella michiganensis M5al

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 610 experiments or choose conditions or try the comparative fitness browser

500 ntBWI76_RS26340 and BWI76_RS26345 overlap by 4 nucleotidesBWI76_RS26345 and BWI76_RS26350 are separated by 60 nucleotidesBWI76_RS26350 and BWI76_RS26355 are separated by 153 nucleotidesBWI76_RS26355 and BWI76_RS26360 are separated by 31 nucleotides BWI76_RS26340: BWI76_RS26340 - branched-chain amino acid ABC transporter permease, at 5,452,093 to 5,453,373 _RS26340 BWI76_RS26345: BWI76_RS26345 - branched-chain amino acid ABC transporter permease LivH, at 5,453,370 to 5,454,296 _RS26345 BWI76_RS26350: BWI76_RS26350 - branched chain amino acid ABC transporter substrate-binding protein, at 5,454,357 to 5,455,466 _RS26350 BWI76_RS26355: BWI76_RS26355 - hypothetical protein, at 5,455,620 to 5,455,855 _RS26355 BWI76_RS26360: BWI76_RS26360 - aspartate 1-decarboxylase autocleavage activator PanM, at 5,455,887 to 5,456,273 _RS26360
Group Condition BWI76_RS26340 BWI76_RS26345 BWI76_RS26350 BWI76_RS26355 BWI76_RS26360
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.5 -0.6 -0.5 -0.7 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -1.0 -0.1 -0.1 -0.8 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.7 -0.7 +0.3 -0.6 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.9 -0.0 -0.3 -0.5 N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.6 -0.4 +0.2 -0.7 N.D.
phage K. M5a1 KLEB22 MOI 10 +0.2 -0.6 -0.5 -0.2 N.D.
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.4 -0.0 -1.1 N.D.
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.5 -1.2 +0.0 +0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.7 -0.2 +0.7 -0.2 N.D.
supernatant control Vogels_fungal_media; pH 5.5 -0.3 -0.4 -0.3 +0.6 N.D.
nitrogen source D-Alanine (N) -0.5 -0.7 +0.2 +0.6 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.4 +0.3 +0.3 -0.5 N.D.
phage KLEB17 MOI 1 +0.2 -0.9 +0.5 +0.0 N.D.
stress Chloramphenicol 0.001 mg/ml -0.3 -0.5 +0.4 +0.3 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 +0.4 +0.5 -0.6 N.D.
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL -0.3 +0.7 +0.4 -0.3 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 +0.5 +0.6 -0.3 N.D.
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.2 +0.8 +0.1 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +0.3 +0.4 -0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.5 +0.5 +0.2 -0.3 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.3 -0.4 +0.7 +0.4 N.D.
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x +0.1 +0.9 -0.3 +0.6 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.6 +0.1 +0.7 -0.1 N.D.
carbon source D-Glucose 20 mM (C) -0.0 +0.6 +0.3 +0.5 N.D.
phage KLEB1 MOI 10 +0.4 +0.4 +0.4 +0.4 N.D.
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL +0.3 +0.2 +0.3 +1.0 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.0 +0.5 +1.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.0 +0.2 +0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +0.2 -0.2 +1.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 +0.4 +0.3 N.D.
remove
BWI76_RS26340
plot		 remove
BWI76_RS26345
plot		 remove
BWI76_RS26350		 remove
BWI76_RS26355
plot		 remove
BWI76_RS26360
plot