Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS26330	BWI76_RS26335	BWI76_RS26340	BWI76_RS26345	BWI76_RS26350
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-1.2	-0.7	-0.7	-0.7	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.9	-0.4	-0.5	-0.6	-0.5
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-1.7	-0.3	-0.6	-0.4	+0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.6	+0.1	-0.9	-0.0	-0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.8	-0.5	-0.7	-0.0	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.2	-0.9	-1.0	-0.1	-0.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.0	-0.1	-0.6	-0.2	-0.3
carbon source	D-Alanine (C)	-0.4	-1.0	-0.5	-0.4	+0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-1.2	-0.1	-0.4	+0.4	-0.1
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.7	-0.3	-0.6	+0.4	-0.1
phage	KLEB31 MOI 1	-0.7	+0.6	-0.5	-0.4	+0.2
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.4	+0.4	-0.5	-1.2	+0.0
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-1.5	+0.1	+0.1	+0.9	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.4	-0.1	-0.7	-0.2	+0.7
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.7	+0.3	-0.5	+0.4	+0.2
phage	K. M5a1 KLEB22 MOI 10	+0.3	+0.6	+0.2	-0.6	-0.5
nitrogen source	Cytosine (N)	+1.0	-0.3	-0.3	-0.3	+0.3
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	-0.8	+0.5	+0.3	+0.1	+0.5
carbon source	L-Sorbose (C)	+0.8	+0.1	-0.1	-0.5	+0.5
nitrogen source	D-Serine (N)	+0.6	-0.5	+0.3	-0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	-0.6	+0.1	+0.0	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7	-0.9	+0.4	+1.6	+0.4
phage	KLEB17 MOI 1	-0.5	+0.9	+0.2	+0.1	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.2	+0.5	-0.3	+0.5	+0.6
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.5	+0.9	-0.2	+0.7	-0.3
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.6	+0.7	-0.2	+0.3	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.9	-0.0	+0.4	+0.3	+0.4
carbon source	D-Serine (C)	+0.9	+0.5	+0.1	+0.2	+0.4
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	+0.5	+1.0	+0.3	+0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.0	-0.3	+0.5	+1.0	+0.2