Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS26325	BWI76_RS26330	BWI76_RS26335	BWI76_RS26340	BWI76_RS26345
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.1	-1.2	-0.7	-0.7	-0.7
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.6	-0.9	-0.4	-0.5	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.1	-1.7	-0.3	-0.6	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.2	-1.6	+0.1	-0.9	-0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.3	-0.2	-0.9	-1.0	-0.1
carbon source	D-Alanine (C)	-0.0	-0.4	-1.0	-0.5	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.2	-0.8	-0.5	-0.7	-0.0
nitrogen source	L-Threonine (N)	-0.1	-0.7	-0.5	-0.2	-0.5
phage	KLEB30 MOI 1	-0.8	+0.1	-0.5	-0.2	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.6	-1.2	-0.1	-0.4	+0.4
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.1	-1.0	-0.1	-0.6	-0.2
nitrogen source	Uridine (N)	+0.3	-0.6	-0.6	-0.0	-0.5
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.4	+0.4	+0.4	-0.5	-1.2
phage	KLEB31 MOI 1	-0.2	-0.7	+0.6	-0.5	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.1	-0.7	-0.3	-0.6	+0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.3	-1.5	+0.1	+0.1	+0.9
nitrogen source	Thymine (N)	-0.9	-0.4	+0.1	+0.5	+0.0
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.2	-0.7	+0.3	-0.5	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	+0.6	-0.1	-0.6	+0.4
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.4	-0.5	+0.3	+0.0	+0.8
nitrogen source	Cytosine (N)	+0.1	+1.0	-0.3	-0.3	-0.3
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.2	-0.8	+0.5	+0.3	+0.1
phage	KLEB17 MOI 1	+0.3	-0.5	+0.9	+0.2	+0.1
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.3	+0.6	+0.7	-0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7	-0.7	-0.9	+0.4	+1.6
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.4	+1.0	+0.3	-0.4	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5	+0.9	-0.0	+0.4	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.1	+1.0	-0.3	+0.5	+1.0
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.3	+0.5	+0.9	-0.2	+0.7
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	+0.2	+0.5	+1.0	+0.3	+0.2