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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS26300 and BWI76_RS26305 are separated by 122 nucleotides
BWI76_RS26305 and BWI76_RS26310 are separated by 271 nucleotides
BWI76_RS26310 and BWI76_RS26315 are separated by 229 nucleotides
BWI76_RS26315 and BWI76_RS26320 are separated by 18 nucleotides
BWI76_RS26300: BWI76_RS26300 - glycerol-3-phosphate transporter permease, at 5,443,117 to 5,444,004
_RS26300
BWI76_RS26305: BWI76_RS26305 - sn-glycerol-3-phosphate ABC transporter substrate-binding protein, at 5,444,127 to 5,445,443
_RS26305
BWI76_RS26310: BWI76_RS26310 - IclR family transcriptional regulator, at 5,445,715 to 5,446,482
_RS26310
BWI76_RS26315: BWI76_RS26315 - dihydrodipicolinate synthase family protein, at 5,446,712 to 5,447,611
_RS26315
BWI76_RS26320: BWI76_RS26320 - MFS transporter, at 5,447,630 to 5,448,940
_RS26320
Group
Condition
BWI76
_RS26300
BWI76
_RS26305
BWI76
_RS26310
BWI76
_RS26315
BWI76
_RS26320
phage
K. M5a1 KLEB26 MOI 0.1
-0.7
-1.2
-0.3
-0.7
-0.1
carbon source
D-Alanine (C)
-0.0
-0.1
-1.9
-0.1
+0.2
rhizosphere
rhizosphere EcoFAB sample 3; outgrowth in LB
+0.0
-0.2
-1.2
-0.2
-0.1
phage
KLEB26 MOI0.1
-0.3
-0.4
-0.4
-0.4
-0.1
phage
KLEB31 MOI 1
-0.2
-0.5
-0.6
-0.1
-0.2
carbon source
L-Glutamine (C)
-0.2
+0.0
-1.3
-0.2
+0.1
mixed community
RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
-0.2
-0.3
-0.5
-0.3
-0.0
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.3
-0.2
-0.9
+0.1
-0.1
carbon source
D,L-Malic Acid (C)
-0.1
-0.1
-1.3
+0.2
+0.0
phage
KLEB16 MOI 10
-0.6
-0.4
-0.0
+0.1
-0.3
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
-0.3
+0.2
-0.9
-0.1
-0.0
carbon source
succinate (C)
+0.4
+0.3
-2.1
-0.0
+0.2
stress
RCH2_defined_1percent_glucose with Chloride 600 mM
-0.4
+0.2
-0.4
-0.3
-0.1
rhizosphere
rhizosphere sample 1; outgrowth in LB
+0.2
-0.3
-0.7
+0.2
-0.4
carbon source
D-Alanine (C)
+0.3
-0.1
-1.3
+0.1
+0.1
supernatant control
Vogels_fungal_media; pH 5.5
-0.9
-0.1
+0.5
-0.1
-0.2
mixed community
RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
+0.5
-0.5
-0.5
-0.2
-0.2
carbon source
D,L-Malic Acid (C)
+0.4
+0.2
-1.2
-0.1
-0.0
carbon source
succinate (C)
+0.2
+0.2
-1.4
+0.1
+0.3
carbon source
Gly-Glu (C)
-0.2
-0.2
-0.6
+0.4
-0.0
carbon source
L-Sorbose (C)
-0.4
+0.2
-0.5
-0.1
+0.2
carbon source
D-Lactate (C)
+0.4
+0.1
-0.9
+0.1
+0.0
phage
KLEB1 MOI 10
-0.7
+0.5
+0.2
+0.2
-0.0
nitrogen source
L-Phenylalanine (N)
+0.6
-0.4
+0.1
-0.2
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.3
-0.6
-0.0
+0.3
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+0.4
+0.7
-0.2
-0.1
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.8
-0.3
+0.5
-0.1
stress
Cobalt chloride 0.5 mM
+0.6
+0.1
+0.5
+0.1
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.6
+0.5
-0.2
+0.3
+0.2
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
+2.7
+0.1
+0.6
+0.1
+0.4
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