Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS26185	BWI76_RS26190	BWI76_RS26195	BWI76_RS26200	BWI76_RS26205
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	+0.6	-7.8	-0.8	-0.5	+0.5
carbon source	L-Sorbose (C)	-0.6	-6.0	+0.1	+0.1	+0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.0	-3.9	+0.0	-1.2	-0.8
carbon source	Glycerol (C)	-0.1	-5.0	-0.1	+0.2	-0.3
carbon source	L-Sorbose (C)	-0.2	-5.3	-0.0	-0.0	+0.6
nitrogen source	Thymine (N)	-1.7	+0.2	-0.2	-0.6	-1.5
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.2	-0.6	-0.8	-1.3	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-2.0	-0.2	-0.4	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	-2.4	-0.4	-0.4	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	-2.2	-0.1	-0.5	+0.1
nitrogen source	L-Lysine (N)	-0.1	+0.2	+0.1	-2.7	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.7	-0.3	+0.1	-1.9	-0.4
nitrogen source	L-Lysine (N)	-0.1	-0.2	+0.2	-2.4	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.2	-0.1	-0.2	-3.0	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7	-1.7	+0.1	-0.7	+0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	+0.5	-0.3	-0.1	-2.7	+0.3
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.6	-0.9	-0.1	-1.4	-0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL	+0.4	-0.5	-0.1	-2.5	+0.4
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.4	-1.3	+0.0	-1.7	+0.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	+0.4	-1.2	-0.1	-1.5	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	-1.7	-0.1	-0.7	+0.9
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	+0.8	-1.1	-0.1	-1.5	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	+0.7	-1.0	+0.1	-1.0	+0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+1.7	-0.3	+0.2	-2.4	+0.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+1.0	-0.7	+0.3	-1.2	+0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+1.1	-0.5	+0.2	-0.9	+0.9
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+1.6	-0.2	+0.2	-1.3	+1.2
stress	Sisomicin 0.008 mg/ml	+1.6	+0.7	+0.1	-1.4	+0.7
stress	Cobalt chloride 0.5 mM	-0.9	+2.6	-0.1	+1.0	-0.1
stress	Cobalt chloride 0.5 mM	-0.2	+2.8	-0.1	+0.2	+0.1