Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS26050 and BWI76_RS26055 are separated by 11 nucleotidesBWI76_RS26055 and BWI76_RS26060 are separated by 89 nucleotidesBWI76_RS26060 and BWI76_RS26065 are separated by 3 nucleotidesBWI76_RS26065 and BWI76_RS26070 overlap by 8 nucleotides BWI76_RS26050: BWI76_RS26050 - nitrite transporter NirC, at 5,383,145 to 5,383,954 _RS26050 BWI76_RS26055: BWI76_RS26055 - siroheme synthase, at 5,383,966 to 5,385,339 _RS26055 BWI76_RS26060: BWI76_RS26060 - tryptophan--tRNA ligase, at 5,385,429 to 5,386,433 _RS26060 BWI76_RS26065: BWI76_RS26065 - phosphoglycolate phosphatase, at 5,386,437 to 5,387,186 _RS26065 BWI76_RS26070: BWI76_RS26070 - ribulose-phosphate 3-epimerase, at 5,387,179 to 5,387,856 _RS26070
Group Condition BWI76_RS26050 BWI76_RS26055 BWI76_RS26060 BWI76_RS26065 BWI76_RS26070
nitrogen source Thymine (N) +0.1 -4.7 +0.3 -1.4 N.D.
carbon source D-Lactate (C) +0.3 -2.4 -1.3 -2.2 N.D.
carbon source D-Glucose 20 mM (C) +0.0 -4.2 +0.3 -1.4 N.D.
nitrogen source D-Serine (N) -0.0 -3.7 +0.0 -1.4 N.D.
carbon source D-Cellobiose (C) +0.0 -4.5 -0.3 -0.3 N.D.
carbon source Cytidine (C) -0.1 -3.0 -0.3 -1.5 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x -0.1 -4.4 -0.5 +0.2 N.D.
nitrogen source L-Arginine (N) +0.2 -2.2 -0.3 -2.5 N.D.
nitrogen source Cytidine (N) -0.1 -3.7 -0.5 -0.5 N.D.
nitrogen source L-Asparagine (N) +0.1 -3.7 -0.2 -0.8 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x +0.1 -3.8 -0.4 -0.4 N.D.
nitrogen source nitrate (N) +1.2 -5.9 +0.1 +0.0 N.D.
nitrogen source L-tyrosine (N) -0.2 -1.2 -0.1 -2.9 N.D.
nitrogen source Cytidine (N) -0.3 -4.2 -0.2 +0.1 N.D.
carbon source Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM -0.2 -4.4 -0.2 +0.5 N.D.
nitrogen source nitrate (N) +1.2 -6.1 +0.3 +0.3 N.D.
nitrogen source D-Serine (N) +0.1 -3.8 -0.0 -0.6 N.D.
nitrogen source L-Glutamine (N) +0.0 -3.9 -0.2 -0.2 N.D.
nitrogen source Ammonium chloride (N) +0.2 -4.3 -0.2 +0.1 N.D.
carbon source L-Rhamnose (C) -0.0 -2.7 +0.1 -1.4 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.4 -3.4 -0.3 +0.2 N.D.
carbon source RCH2_defined_glucose with MS_media 0.5x +0.3 -3.7 -0.1 -0.4 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM +0.2 -3.6 -0.3 +0.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.0 -4.2 +0.1 +0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 -3.7 +0.0 -0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 -4.1 -0.2 +0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 -3.6 -0.3 -0.0 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 -3.3 -0.5 +0.5 N.D.
nitrogen source Adenosine (N) +0.3 -3.1 +0.1 +1.0 N.D.
stress Chlorite 2.5 mM +4.5 -0.3 +0.0 +0.8 N.D.
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