Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS25560 and BWI76_RS25565 are separated by 328 nucleotidesBWI76_RS25565 and BWI76_RS25570 are separated by 24 nucleotidesBWI76_RS25570 and BWI76_RS25575 are separated by 64 nucleotidesBWI76_RS25575 and BWI76_RS25580 are separated by 378 nucleotides BWI76_RS25560: BWI76_RS25560 - carbonic anhydrase, at 5,311,718 to 5,312,458 _RS25560 BWI76_RS25565: BWI76_RS25565 - tRNA dihydrouridine synthase DusB, at 5,312,787 to 5,313,752 _RS25565 BWI76_RS25570: BWI76_RS25570 - Fis family transcriptional regulator, at 5,313,777 to 5,314,073 _RS25570 BWI76_RS25575: BWI76_RS25575 - acrEF/envCD operon transcriptional regulator, at 5,314,138 to 5,314,788 _RS25575 BWI76_RS25580: BWI76_RS25580 - MexX family efflux pump subunit, at 5,315,167 to 5,316,306 _RS25580
Group Condition BWI76_RS25560 BWI76_RS25565 BWI76_RS25570 BWI76_RS25575 BWI76_RS25580
nitrogen source Thymine (N) -0.7 N.D. N.D. -0.0 -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.3 N.D. N.D. -0.2 -0.4
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL -0.7 N.D. N.D. -0.0 -0.1
carbon source RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x -0.4 N.D. N.D. -0.1 -0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.5 N.D. N.D. -0.2 -0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.1 N.D. N.D. -0.3 -0.5
nitrogen source D-Serine (N) -0.2 N.D. N.D. +0.2 -0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 N.D. N.D. +0.2 -0.3
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 N.D. N.D. -0.2 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 N.D. N.D. +0.0 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 N.D. N.D. +0.2 +0.4
phage B3 MOi 10 +0.7 N.D. N.D. -0.2 +0.0
phage KLEB31 MOI 1 +0.7 N.D. N.D. +0.1 -0.1
phage KLEB29 MOI 0.1 +0.5 N.D. N.D. +0.1 +0.2
phage KLEB20 MOI 0.1 +0.5 N.D. N.D. +0.2 +0.1
phage KLEB15 MOI 0.1 +0.3 N.D. N.D. +0.2 +0.3
phage K. M5a1 KLEB23 MOI 1 +0.5 N.D. N.D. +0.2 +0.2
phage KLEB24 MOI 1 +0.5 N.D. N.D. +0.2 +0.2
phage KLEB16 MOI 10 +0.2 N.D. N.D. +0.4 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 N.D. N.D. +0.6 +0.2
phage KLEB15 MOI 1 +0.3 N.D. N.D. +0.2 +0.4
phage KLEB15 MOI 0.1 +0.4 N.D. N.D. +0.3 +0.3
phage KLEB16 MOI 0.1 +0.5 N.D. N.D. +0.4 +0.3
phage KLEB25 MOI 1 +0.5 N.D. N.D. +0.2 +0.4
phage KLEB25 MOI 0.1 +0.3 N.D. N.D. +0.3 +0.6
phage KLEB24 MOI 1 +0.7 N.D. N.D. +0.2 +0.2
carbon source Gly-Glu (C) +0.7 N.D. N.D. +0.1 +0.4
phage KLEB29 MOI 1 +0.6 N.D. N.D. +0.3 +0.4
phage KLEB20 MOI 0.1 +1.0 N.D. N.D. +0.1 +0.2
phage KLEB16 MOI 1 +0.4 N.D. N.D. +0.6 +0.7
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BWI76_RS25560
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