Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS25530 and BWI76_RS25535 overlap by 28 nucleotidesBWI76_RS25535 and BWI76_RS25540 are separated by 10 nucleotidesBWI76_RS25540 and BWI76_RS25545 are separated by 110 nucleotidesBWI76_RS25545 and BWI76_RS25550 overlap by 11 nucleotides BWI76_RS25530: BWI76_RS25530 - acetyl-CoA carboxylase, at 5,306,997 to 5,307,086 _RS25530 BWI76_RS25535: BWI76_RS25535 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 5,307,059 to 5,307,532 _RS25535 BWI76_RS25540: BWI76_RS25540 - acetyl-CoA carboxylase biotin carboxylase subunit, at 5,307,543 to 5,308,892 _RS25540 BWI76_RS25545: BWI76_RS25545 - hypothetical protein, at 5,309,003 to 5,309,245 _RS25545 BWI76_RS25550: BWI76_RS25550 - sodium:pantothenate symporter, at 5,309,235 to 5,310,686 _RS25550
Group Condition BWI76_RS25530 BWI76_RS25535 BWI76_RS25540 BWI76_RS25545 BWI76_RS25550
nitrogen source L-Cysteine (N) N.D. N.D. N.D. -2.0 -0.3
nitrogen source D-Serine (N) N.D. N.D. N.D. -1.4 -0.4
nitrogen source L-Arginine (N) N.D. N.D. N.D. -1.8 +0.1
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days N.D. N.D. N.D. -1.4 +0.1
phage KLEB17 MOI 1 N.D. N.D. N.D. -1.6 +0.4
stress Cobalt chloride 0.5 mM N.D. N.D. N.D. -1.5 +0.5
carbon source 2'-Deoxycytidine 10 mM (C) N.D. N.D. N.D. -1.1 +0.2
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. N.D. N.D. -1.1 +0.2
nitrogen source Uridine (N) N.D. N.D. N.D. -1.1 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. -1.1 +0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. N.D. -0.7 +0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. N.D. N.D. +1.1 -0.3
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM N.D. N.D. N.D. +1.1 -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. N.D. +1.1 -0.2
stress Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM N.D. N.D. N.D. +1.1 -0.2
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM N.D. N.D. N.D. +1.2 -0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. N.D. +0.5 +0.8
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. N.D. N.D. +1.6 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. +0.8 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. N.D. +1.2 +0.1
carbon source Inosine (C) N.D. N.D. N.D. +1.0 +0.3
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. N.D. N.D. +1.0 +0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. N.D. +1.3 +0.1
phage KLEB17 MOI 1 N.D. N.D. N.D. +1.1 +0.2
control NoPredeControl N.D. N.D. N.D. +1.6 -0.1
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL N.D. N.D. N.D. +1.4 +0.1
stress Sisomicin 0.008 mg/ml N.D. N.D. N.D. +0.7 +0.9
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x N.D. N.D. N.D. +1.4 +0.2
stress Sisomicin 0.008 mg/ml N.D. N.D. N.D. +1.4 +0.5
carbon source Gly-Glu (C) N.D. N.D. N.D. +1.8 +0.3
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