Fitness for 5 genes in Klebsiella michiganensis M5al

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 610 experiments or choose conditions or try the comparative fitness browser

500 ntBWI76_RS25500 and BWI76_RS25505 are separated by 305 nucleotidesBWI76_RS25505 and BWI76_RS25510 are separated by 219 nucleotidesBWI76_RS25510 and BWI76_RS25515 are separated by 77 nucleotidesBWI76_RS25515 and BWI76_RS25520 overlap by 1 nucleotides BWI76_RS25500: BWI76_RS25500 - rod shape-determining protein, at 5,300,504 to 5,301,547 _RS25500 BWI76_RS25505: BWI76_RS25505 - RNase E specificity factor CsrD, at 5,301,853 to 5,303,793 _RS25505 BWI76_RS25510: BWI76_RS25510 - oxidoreductase, at 5,304,013 to 5,304,987 _RS25510 BWI76_RS25515: BWI76_RS25515 - sulfoxide reductase, at 5,305,065 to 5,306,066 _RS25515 BWI76_RS25520: BWI76_RS25520 - sulfoxide reductase heme-binding subunit YedZ, at 5,306,066 to 5,306,665 _RS25520
Group Condition BWI76_RS25500 BWI76_RS25505 BWI76_RS25510 BWI76_RS25515 BWI76_RS25520
nitrogen source Thymine (N) N.D. -2.6 -0.2 -0.1 -0.0
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. -1.0 -0.0 -1.4 -0.3
nitrogen source Thymidine (N) N.D. -2.0 +0.1 -0.3 -0.1
stress Chlorite 2.5 mM N.D. -0.7 +0.4 -1.0 -1.0
nitrogen source Thymidine (N) N.D. -2.0 +0.2 -0.2 -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. -1.5 +0.2 +0.3 -0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X N.D. -1.5 +0.5 +0.0 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. -1.5 +0.4 +0.2 -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -1.6 +0.4 +0.2 +0.0
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml N.D. -1.4 +0.6 -0.4 +0.3
phage KLEB17 MOI 1 N.D. -1.0 +0.7 +0.2 -0.7
nitrogen source L-Threonine (N) N.D. -1.5 +0.3 +0.3 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -1.5 +0.5 +0.4 -0.1
nitrogen source Glucuronamide (N) N.D. -1.7 +0.6 +0.0 +0.4
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM N.D. -1.6 +0.2 +0.4 +0.4
carbon source D-Lactate (C) N.D. -1.3 +0.4 +0.4 -0.1
carbon source D,L-Malic Acid (C) N.D. -1.4 +0.4 +0.2 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x N.D. -1.3 +1.0 +0.1 +0.0
phage KLEB17 MOI 1 N.D. -1.1 +0.9 -0.2 +0.2
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. -1.1 +0.7 +0.4 -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -1.1 +0.4 +0.5 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.3 +1.1 -0.7 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 +0.6 +1.1 -0.5
stress Cephalothin 0.16 mg/ml N.D. +1.7 -0.4 +0.3 +0.2
phage KLEB31 MOI 1 N.D. +2.2 -0.3 +0.0 -0.1
phage KLEB30 MOI 1 N.D. +1.6 -0.1 +0.5 +0.1
phage KLEB29 MOI 1 N.D. +1.9 -0.2 +0.3 +0.1
carbon source succinate (C) N.D. +1.6 +0.2 +0.3 +0.3
phage KLEB30 MOI 1 N.D. +1.8 -0.1 +0.4 +0.2
stress Cephalothin 0.16 mg/ml N.D. +1.8 -0.0 +0.3 +0.5
remove
BWI76_RS25500
plot
remove
BWI76_RS25505
plot
remove
BWI76_RS25510
remove
BWI76_RS25515
plot
remove
BWI76_RS25520
plot