Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS25355 and BWI76_RS25360 are separated by 190 nucleotidesBWI76_RS25360 and BWI76_RS25365 are separated by 172 nucleotidesBWI76_RS25365 and BWI76_RS25370 are separated by 86 nucleotidesBWI76_RS25370 and BWI76_RS25375 are separated by 26 nucleotides BWI76_RS25355: BWI76_RS25355 - cell division protein ZapE, at 5,270,034 to 5,271,167 _RS25355 BWI76_RS25360: BWI76_RS25360 - hypothetical protein, at 5,271,358 to 5,271,756 _RS25360 BWI76_RS25365: BWI76_RS25365 - serine endoprotease DegQ, at 5,271,929 to 5,273,296 _RS25365 BWI76_RS25370: BWI76_RS25370 - outer membrane-stress sensor serine endopeptidase DegS, at 5,273,383 to 5,274,441 _RS25370 BWI76_RS25375: BWI76_RS25375 - hypothetical protein, at 5,274,468 to 5,275,166 _RS25375
Group Condition BWI76_RS25355 BWI76_RS25360 BWI76_RS25365 BWI76_RS25370 BWI76_RS25375
carbon source succinate (C) -3.7 N.D. +0.1 N.D. -0.5
carbon source succinate (C) -3.3 N.D. +0.1 N.D. -0.0
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL -0.1 N.D. -0.0 N.D. -2.8
carbon source Trisodium citrate (C) -2.7 N.D. +0.1 N.D. -0.2
carbon source Trisodium citrate (C) -2.1 N.D. -0.2 N.D. -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 N.D. +0.2 N.D. -1.6
carbon source acetate (C) -2.5 N.D. +0.1 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.2 N.D. +0.2 N.D. -1.2
ecofab LB in EcoFAB_10mL EcoFab with sand -1.0 N.D. -0.2 N.D. -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 N.D. -0.2 N.D. -0.9
carbon source acetate (C) -2.1 N.D. +0.2 N.D. -0.1
nitrogen source L-Proline (N) -1.9 N.D. +0.0 N.D. -0.1
phage KLEB1 MOI 10 +0.1 N.D. -0.1 N.D. -1.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 N.D. +0.1 N.D. -0.9
carbon source D,L-Malic Acid (C) -1.4 N.D. -0.3 N.D. +0.4
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 N.D. +0.8 N.D. -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 N.D. +0.6 N.D. -0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.6 N.D. +0.8 N.D. +0.3
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -1.2 N.D. +0.1 N.D. +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 N.D. +0.4 N.D. +0.6
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.25x -0.6 N.D. +1.0 N.D. -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 N.D. -0.2 N.D. +1.5
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.6 N.D. -0.2 N.D. +1.1
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.7 N.D. +0.6 N.D. +0.7
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.6 N.D. +1.1 N.D. +0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.5 N.D. -0.1 N.D. +1.6
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.6 N.D. +1.0 N.D. +0.8
nitrogen source Thymine (N) -0.6 N.D. +0.1 N.D. +1.7
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.1 N.D. +0.8 N.D. +1.5
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 N.D. +1.2 N.D. +1.2
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BWI76_RS25355
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