Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS25075 and BWI76_RS25080 are separated by 147 nucleotidesBWI76_RS25080 and BWI76_RS25085 overlap by 1 nucleotidesBWI76_RS25085 and BWI76_RS25090 are separated by 91 nucleotidesBWI76_RS25090 and BWI76_RS25095 are separated by 24 nucleotides BWI76_RS25075: BWI76_RS25075 - 30S ribosomal protein S15, at 5,220,826 to 5,221,095 _RS25075 BWI76_RS25080: BWI76_RS25080 - tRNA pseudouridine(55) synthase, at 5,221,243 to 5,222,187 _RS25080 BWI76_RS25085: BWI76_RS25085 - ribosome-binding factor A, at 5,222,187 to 5,222,588 _RS25085 BWI76_RS25090: BWI76_RS25090 - translation initiation factor IF-2, at 5,222,680 to 5,225,370 _RS25090 BWI76_RS25095: BWI76_RS25095 - transcription termination protein NusA, at 5,225,395 to 5,226,882 _RS25095
Group Condition BWI76_RS25075 BWI76_RS25080 BWI76_RS25085 BWI76_RS25090 BWI76_RS25095
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.1 N.D. N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. -0.9 N.D. N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB N.D. -0.9 N.D. N.D. N.D.
stress Benzalkonium Chloride 0.004mg/ml N.D. -0.8 N.D. N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB N.D. -0.8 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.7 N.D. N.D. N.D.
carbon source D-Lactate (C) N.D. -0.7 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -0.7 N.D. N.D. N.D.
nitrogen source L-Threonine (N) N.D. -0.7 N.D. N.D. N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. +0.7 N.D. N.D. N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. +0.7 N.D. N.D. N.D.
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM N.D. +0.7 N.D. N.D. N.D.
phage KLEB31 MOI 1 N.D. +0.7 N.D. N.D. N.D.
phage KLEB29 MOI 1 N.D. +0.8 N.D. N.D. N.D.
phage KLEB24 MOI 1 N.D. +0.8 N.D. N.D. N.D.
carbon source succinate (C) N.D. +0.8 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.8 N.D. N.D. N.D.
carbon source D-Raffinose (C) N.D. +1.0 N.D. N.D. N.D.
phage KLEB29 MOI 1 N.D. +1.0 N.D. N.D. N.D.
phage KLEB24 MOI 1 N.D. +1.1 N.D. N.D. N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. +1.2 N.D. N.D. N.D.
stress Nickel (II) chloride 1 mM N.D. +1.2 N.D. N.D. N.D.
carbon source D-Raffinose (C) N.D. +1.4 N.D. N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB N.D. +1.7 N.D. N.D. N.D.
stress Nickel (II) chloride 1.5 mM N.D. +1.8 N.D. N.D. N.D.
stress Nickel (II) chloride 1.5 mM N.D. +1.9 N.D. N.D. N.D.
stress Sisomicin 0.008 mg/ml N.D. +2.1 N.D. N.D. N.D.
stress Sisomicin 0.008 mg/ml N.D. +2.4 N.D. N.D. N.D.
stress Cobalt chloride 0.5 mM N.D. +3.4 N.D. N.D. N.D.
stress Cobalt chloride 0.5 mM N.D. +4.2 N.D. N.D. N.D.
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