Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS24820	BWI76_RS24825	BWI76_RS24830	BWI76_RS24835	BWI76_RS24840
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8	-1.3	-0.8	+0.1	-0.0
phage	KLEB31 MOI 1	+0.2	-1.7	-0.2	-0.3	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	-1.8	-0.1	-0.0	-0.2
phage	KLEB29 MOI 1	-0.2	-1.4	-0.2	+0.1	-0.2
phage	KLEB29 MOI 1	+0.2	-1.6	-0.1	-0.0	-0.4
phage	KLEB20 MOI 1	-0.9	-0.6	-0.4	+0.4	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-1.8	-0.1	-0.2	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	-1.0	-0.2	-0.4	+0.3
stress	Cobalt chloride 0.5 mM	-0.5	+0.6	-0.4	-0.3	-0.4
carbon source	D-Salicin (C)	+0.2	-1.5	+0.2	-0.1	+0.4
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x	+0.3	-1.0	+0.2	+0.1	-0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.2	-1.3	+0.2	+0.2	-0.1
phage	KLEB17 MOI 1	+0.9	-0.6	-1.0	+0.0	+0.0
phage	KLEB16 MOI 1	-0.6	+0.7	+0.1	-0.4	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	+0.5	-1.0	+0.5	+0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	-0.5	+1.0	-0.1	-0.2
nitrogen source	nitrate (N)	+1.1	-0.6	+0.3	-0.2	-0.0
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	+0.6	+0.7	+0.5	-0.8	+0.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and 2,2'-Dipyridyl 50 uM	-0.2	+1.0	+0.5	-0.2	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	+0.5	+0.4	+0.2	+0.6
stress	Chloramphenicol 0.001 mg/ml	-0.1	+0.6	+0.8	+0.4	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	+0.9	+0.2	+0.4	-0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.5	+1.0	+0.7	-0.4	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+2.1	-0.2	+0.1	+0.1	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.6	+0.9	+0.6	-0.0
carbon source	D-Glucose 20 mM (C)	+0.4	+0.7	+0.5	+0.2	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.2	+1.4	+0.3	-0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	+1.5	+0.4	+0.0	-0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.2	+0.9	+0.7	+0.2	+0.1
carbon source	Gly-Glu (C)	+3.8	-0.3	+0.1	-0.0	+0.5