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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS24775 and BWI76_RS24780 are separated by 74 nucleotides
BWI76_RS24780 and BWI76_RS24785 are separated by 126 nucleotides
BWI76_RS24785 and BWI76_RS24790 are separated by 37 nucleotides
BWI76_RS24790 and BWI76_RS24795 are separated by 104 nucleotides
BWI76_RS24775: BWI76_RS24775 - hypothetical protein, at 5,164,884 to 5,165,276
_RS24775
BWI76_RS24780: BWI76_RS24780 - glutathione-dependent reductase, at 5,165,351 to 5,166,337
_RS24780
BWI76_RS24785: BWI76_RS24785 - DUF805 domain-containing protein, at 5,166,464 to 5,166,832
_RS24785
BWI76_RS24790: BWI76_RS24790 - LysR family transcriptional regulator, at 5,166,870 to 5,167,766
_RS24790
BWI76_RS24795: BWI76_RS24795 - hypothetical protein, at 5,167,871 to 5,168,572
_RS24795
Group
Condition
BWI76
_RS24775
BWI76
_RS24780
BWI76
_RS24785
BWI76
_RS24790
BWI76
_RS24795
phage
K. M5a1 KLEB23 MOI 1
+0.1
-0.0
-1.4
-0.2
-0.7
nitrogen source
Gly-DL-Asp (N)
+0.1
-0.1
-1.5
+0.3
-0.8
phage
KLEB1 MOI 0.1
-0.4
-0.5
-0.4
-0.3
-0.3
lb
LB
-0.2
+0.2
-1.0
-0.1
-0.5
phage
KLEB16 MOI 10
-0.3
-0.6
-0.7
+0.0
+0.2
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
+0.6
-0.0
-0.8
+0.1
-0.5
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
-0.6
-0.4
-0.3
+0.2
+0.4
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
+0.1
+0.3
-1.3
+0.1
+0.7
nitrogen source
Thymine (N)
+0.6
-0.2
-0.7
-0.2
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.6
-0.2
+0.3
-0.4
micoeukaryotes
Dictyostellum sp.mixed culture-1
+0.8
+0.2
-0.2
-0.5
-0.2
nitrogen source
L-Arginine (N)
-0.2
+0.4
-0.7
+0.2
+0.5
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
-0.5
+0.3
+0.4
+0.4
-0.3
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+0.6
+0.5
-0.4
+0.2
-0.2
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.7
-0.3
+0.3
+0.5
-0.1
mixed community
RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
+0.4
+0.3
+0.4
+0.2
-0.4
nitrogen source
L-Arginine (N)
-0.6
+0.7
-0.1
+0.2
+0.9
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.2
-0.3
+0.8
+0.1
+0.5
phage
KLEB29 MOI 1
+0.7
+0.2
-0.1
-0.0
+0.7
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
-0.3
+0.4
+1.0
+0.2
+0.3
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.4
+0.5
+0.5
+0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
+0.3
+0.5
+0.7
-0.2
+0.2
carbon source
Gly-Glu (C)
+0.2
+0.7
-0.2
-0.0
+1.0
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x
+0.4
-0.2
+0.2
+0.2
+1.0
stress
Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
+1.0
+0.1
-0.0
+0.4
+0.4
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
+0.6
+0.4
+0.4
+0.4
+0.0
micoeukaryotes
Acanthamoeba sp., muxed culture-2
+1.0
+0.3
+0.4
+0.0
+0.2
stress
Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
+0.6
+0.1
+0.6
+0.3
+0.5
supernatant
Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x
+0.7
+0.2
+0.5
+0.3
+0.3
stress
Chloramphenicol 0.001 mg/ml
+0.3
-0.0
+1.0
+0.7
+0.3
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