Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS24515 and BWI76_RS24520 are separated by 0 nucleotidesBWI76_RS24520 and BWI76_RS24525 are separated by 8 nucleotidesBWI76_RS24525 and BWI76_RS24530 are separated by 151 nucleotidesBWI76_RS24530 and BWI76_RS24535 are separated by 46 nucleotides BWI76_RS24515: BWI76_RS24515 - urease accessory protein UreE, at 5,111,352 to 5,111,822 _RS24515 BWI76_RS24520: BWI76_RS24520 - urease accessory protein UreF, at 5,111,823 to 5,112,497 _RS24520 BWI76_RS24525: BWI76_RS24525 - urease accessory protein UreG, at 5,112,506 to 5,113,123 _RS24525 BWI76_RS24530: BWI76_RS24530 - cytosine/purines uracil thiamine allantoin permease, at 5,113,275 to 5,114,882 _RS24530 BWI76_RS24535: BWI76_RS24535 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 5,114,929 to 5,115,942 _RS24535
Group Condition BWI76_RS24515 BWI76_RS24520 BWI76_RS24525 BWI76_RS24530 BWI76_RS24535
nitrogen source Parabanic Acid (N) -2.2 -2.9 -3.1 -0.6 N.D.
nitrogen source Parabanic Acid (N) -2.3 -3.3 -2.5 -0.6 N.D.
nitrogen source L-Citrulline (N) -0.3 -0.8 -0.7 -0.3 N.D.
nitrogen source L-Arginine (N) -0.8 -0.2 -1.2 +0.2 N.D.
phage K. M5a1 KLEB26 MOI 0.1 -0.7 -0.6 -0.3 -0.3 N.D.
phage KLEB16 MOI 10 -0.4 -0.5 -0.5 -0.2 N.D.
nitrogen source Gly-DL-Asp (N) -0.5 -0.1 -0.9 +0.5 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.0 -0.0 +0.7 N.D.
stress Sisomicin 0.008 mg/ml -0.5 -0.3 +0.8 -0.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.9 +0.1 -0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.0 -1.0 +0.4 +0.3 N.D.
stress Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM +0.1 +0.1 -0.9 +0.4 N.D.
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days -0.6 +0.6 -0.1 +0.2 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 -0.6 +0.8 -0.1 N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL +0.6 -0.0 -0.9 +0.6 N.D.
phage KLEB30 MOI 1 -0.5 +0.4 +0.6 +0.0 N.D.
phage KLEB17 MOI 1 -0.5 +0.1 +0.2 +0.7 N.D.
stress Cobalt chloride 0.5 mM +0.5 -0.1 +0.6 -0.4 N.D.
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +0.4 +0.3 -0.4 +0.4 N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.3 -0.4 +0.5 +0.4 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 +0.5 +0.9 +0.0 N.D.
nitrogen source Glycine (N) -0.3 +0.8 +0.5 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 +0.2 +0.4 +0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.8 +0.6 -0.2 N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.9 +0.6 -0.2 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.1 +1.1 +0.2 N.D.
carbon source L-Sorbose (C) +0.0 +0.7 +0.8 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 -0.0 +0.8 +0.0 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.1 +0.6 +0.9 +0.3 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.3 -0.1 +2.4 +0.2 N.D.
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