Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS24235	BWI76_RS24240	BWI76_RS24245	BWI76_RS24250	BWI76_RS24255
nitrogen source	L-Leucine (N)	-1.7	-2.7	-0.1	-0.0	+0.3
nitrogen source	L-Leucine (N)	-1.6	-2.2	-0.0	+0.1	+0.3
nitrogen source	L-Cysteine (N)	-0.2	-2.4	-0.3	-0.7	+0.3
stress	Cobalt chloride 0.5 mM	-0.6	-0.9	+0.4	-1.0	-0.5
nitrogen source	L-Valine (N)	-1.3	-1.2	+0.3	+0.2	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4	-1.6	-0.3	-0.4	-0.1
nitrogen source	Cytosine (N)	-0.6	-1.6	-0.6	+0.4	+0.7
nitrogen source	L-Cysteine (N)	-0.4	-0.9	+0.4	-0.3	-0.4
nitrogen source	nitrate (N)	-0.6	-0.6	+0.6	+0.5	-0.7
nitrogen source	D-Serine (N)	+0.3	-1.3	-0.2	-0.2	+0.5
nitrogen source	Casamino Acids (N)	-0.4	-0.7	+0.2	-0.6	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-1.1	+0.2	-1.0	+1.8
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.6	-1.0	-0.0	-0.6	+0.4
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.1	-0.9	-0.5	+0.3	+0.7
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	+0.2	+1.0	-0.4	-0.7	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	+0.1	-1.0	+0.6	-0.4	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.5	-1.4	-0.1	+0.1	+0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	-0.8	+0.5	-0.4	+0.7
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.8	+0.8	-0.7	+0.1	+0.5
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.1	+1.0	+0.3	-0.3	-0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.3	-0.6	+0.8	-0.3	+0.6
nitrogen source	Uridine (N)	+0.7	+0.7	-0.6	-0.1	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	+1.0	+0.8	-0.0	-0.6
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	+0.3	+1.2	-0.7	+0.1	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.3	+0.9	-0.7	-0.0	+0.7
stress	Sisomicin 0.008 mg/ml	+0.0	-0.7	+0.7	+0.5	+0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.1	-0.6	+0.3	+0.1	+1.9
carbon source	succinate (C)	+0.2	+1.0	+0.4	-0.3	+0.6
control	NoPredeControl	+0.4	+0.2	+0.3	+0.2	+1.3
phage	K. M5a1 KLEB26 MOI 0.1	+0.1	+1.3	+0.6	+0.6	-0.3