Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS24195 and BWI76_RS24200 are separated by 163 nucleotidesBWI76_RS24200 and BWI76_RS24205 are separated by 102 nucleotidesBWI76_RS24205 and BWI76_RS24210 are separated by 10 nucleotidesBWI76_RS24210 and BWI76_RS24215 are separated by 79 nucleotides BWI76_RS24195: BWI76_RS24195 - anion transporter, at 5,043,561 to 5,044,949 _RS24195 BWI76_RS24200: BWI76_RS24200 - hypothetical protein, at 5,045,113 to 5,045,392 _RS24200 BWI76_RS24205: BWI76_RS24205 - cystathionine beta-synthase, at 5,045,495 to 5,046,865 _RS24205 BWI76_RS24210: BWI76_RS24210 - cystathionine gamma-lyase, at 5,046,876 to 5,048,021 _RS24210 BWI76_RS24215: BWI76_RS24215 - LysR family transcriptional regulator, at 5,048,101 to 5,049,000 _RS24215
Group Condition BWI76_RS24195 BWI76_RS24200 BWI76_RS24205 BWI76_RS24210 BWI76_RS24215
carbon source succinate (C) -2.3 +0.2 -0.7 -0.1 -0.2
carbon source succinate (C) -2.0 +0.0 -0.8 -0.4 +0.0
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.4 -2.1 -0.2 +0.1 +0.4
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.2 -0.8 -0.5 +0.2 -0.4
stress Cobalt chloride 0.5 mM +0.0 -0.7 +0.3 -0.5 -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -0.8 -0.4 +0.1 -0.2
stress Paraquat dichloride 0.1 mg/ml +0.2 -0.7 -0.0 -0.3 -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -1.5 +0.2 -0.2 +0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 -0.7 +0.2 +0.1 -0.3
nitrogen source L-Arginine (N) -0.2 -0.9 +0.3 -0.2 +0.0
nitrogen source D-Alanine (N) -0.1 -0.7 -0.5 +0.4 +0.0
nitrogen source L-Arginine (N) -0.2 -1.3 +0.4 -0.1 +0.4
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.1 -0.7 +0.2 -0.5 +0.4
phage KLEB17 MOI 1 -0.3 -0.1 -0.7 +0.1 +0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.2 -0.8 +0.1 -0.1 +0.6
phage KLEB31 MOI 1 +0.0 +0.7 -0.0 -0.6 -0.5
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x -0.0 +0.7 -0.3 -0.1 -0.6
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -0.8 -0.3 -0.2 +1.4
stress Paraquat dichloride 0.1 mg/ml -0.1 -0.7 -0.1 +0.2 +0.7
stress Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM -0.0 -0.2 +0.8 -0.6 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.4 -0.4 -0.2 +0.4
phage KLEB17 MOI 1 -0.2 +0.5 -0.5 +0.5 +0.3
phage KLEB29 MOI 1 +0.2 +0.6 -0.2 +0.7 -0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.1 +0.4 -0.3 +0.4 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.6 +0.8 -0.4 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.2 +0.9 -0.4 +0.3
ecofab LB in EcoFAB_10mL +0.1 -0.2 -0.3 -0.0 +1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.1 -0.2 +0.6 -0.5 +1.1
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.0 +0.5 +0.1 +0.3 +0.6
phage K. M5a1 KLEB26 MOI 0.1 +0.4 +1.0 +0.3 +0.2 +0.7
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