Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS24175 and BWI76_RS24180 are separated by 70 nucleotidesBWI76_RS24180 and BWI76_RS24185 are separated by 168 nucleotidesBWI76_RS24185 and BWI76_RS24190 are separated by 105 nucleotidesBWI76_RS24190 and BWI76_RS24195 are separated by 135 nucleotides BWI76_RS24175: BWI76_RS24175 - ornithine decarboxylase, at 5,039,952 to 5,042,090 _RS24175 BWI76_RS24180: BWI76_RS24180 - hypothetical protein, at 5,042,161 to 5,042,359 _RS24180 BWI76_RS24185: BWI76_RS24185 - membrane protein, at 5,042,528 to 5,043,244 _RS24185 BWI76_RS24190: BWI76_RS24190 - tRNA-Phe, at 5,043,350 to 5,043,425 _RS24190 BWI76_RS24195: BWI76_RS24195 - anion transporter, at 5,043,561 to 5,044,949 _RS24195
Group Condition BWI76_RS24175 BWI76_RS24180 BWI76_RS24185 BWI76_RS24190 BWI76_RS24195
stress RCH2_defined_1percent_glucose with Chloride 600 mM and Betaine 100 uM -2.6 -1.3 +0.1 N.D. +0.0
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x +0.2 -2.5 -0.8 N.D. -0.0
carbon source succinate (C) -0.1 -0.1 -0.4 N.D. -2.3
stress RCH2_defined_1percent_glucose with Chloride 600 mM and Betaine 100 uM -2.2 -0.5 -0.2 N.D. -0.0
phage KLEB17 MOI 1 +0.1 -2.3 -0.2 N.D. -0.3
stress RCH2_defined_1percent_glucose with Chloride 400 mM and Betaine 100 uM -1.5 -1.0 +0.1 N.D. -0.1
carbon source succinate (C) -0.1 +0.3 -0.4 N.D. -2.0
stress RCH2_defined_1percent_glucose with Betaine 100 uM -0.3 -1.5 -0.2 N.D. -0.0
phage KLEB30 MOI 1 -0.1 -1.5 -0.3 N.D. +0.0
stress Sisomicin 0.008 mg/ml +0.3 -1.5 -0.2 N.D. -0.4
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL +0.2 -1.4 -0.4 N.D. -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 -1.5 -0.2 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -1.5 +0.5 N.D. -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -1.7 +0.1 N.D. +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -1.6 +0.4 N.D. +0.2
nitrogen source D-Alanine (N) -0.2 +0.7 -1.0 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -1.0 +0.7 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -1.0 +0.9 N.D. +0.1
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x +0.6 -0.8 +0.4 N.D. -0.2
nitrogen source D-Serine (N) +0.1 +0.9 -1.1 N.D. +0.1
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.5 +1.0 N.D. -0.3
nitrogen source Thymidine (N) -0.5 +1.2 -0.3 N.D. -0.1
nitrogen source L-Arginine (N) +0.2 +1.1 -0.5 N.D. -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.6 +0.9 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +1.3 -0.6 N.D. -0.1
nitrogen source L-Serine (N) +0.2 +1.2 -0.4 N.D. -0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.2 +1.6 -0.1 N.D. -0.2
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 +1.7 -0.1 N.D. -0.3
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL +0.3 +1.1 +0.4 N.D. -0.1
nitrogen source Cytosine (N) -0.1 +2.0 +0.1 N.D. -0.1
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