Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS24160 and BWI76_RS24165 are separated by 47 nucleotidesBWI76_RS24165 and BWI76_RS24170 are separated by 193 nucleotidesBWI76_RS24170 and BWI76_RS24175 are separated by 67 nucleotidesBWI76_RS24175 and BWI76_RS24180 are separated by 70 nucleotides BWI76_RS24160: BWI76_RS24160 - Fe(2+)-trafficking protein, at 5,037,026 to 5,037,301 _RS24160 BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434 _RS24165 BWI76_RS24170: BWI76_RS24170 - nucleoside permease, at 5,038,628 to 5,039,884 _RS24170 BWI76_RS24175: BWI76_RS24175 - ornithine decarboxylase, at 5,039,952 to 5,042,090 _RS24175 BWI76_RS24180: BWI76_RS24180 - hypothetical protein, at 5,042,161 to 5,042,359 _RS24180
Group Condition BWI76_RS24160 BWI76_RS24165 BWI76_RS24170 BWI76_RS24175 BWI76_RS24180
stress RCH2_defined_1percent_glucose with Chloride 600 mM and Betaine 100 uM N.D. -0.0 -0.1 -2.6 -1.3
stress RCH2_defined_1percent_glucose with Chloride 400 mM and Betaine 100 uM N.D. +0.0 -0.0 -1.5 -1.0
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.1 -1.9 +0.3 -0.8
stress RCH2_defined_1percent_glucose with Chloride 600 mM and Betaine 100 uM N.D. +0.2 -0.0 -2.2 -0.5
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.1 -1.1 +0.2 -1.2
phage KLEB17 MOI 1 N.D. +0.1 -0.1 +0.1 -2.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.2 -1.1 +0.3 -1.5
exudates RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x N.D. +0.3 +0.1 +0.2 -2.5
phage KLEB30 MOI 1 N.D. +0.2 -0.4 -0.1 -1.5
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.1 -1.3 +0.3 -0.7
stress RCH2_defined_1percent_glucose with Betaine 100 uM N.D. +0.3 +0.1 -0.3 -1.5
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. -0.0 -0.2 +0.2 -1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 +0.0 +0.1 -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.3 +0.3 -0.1 -1.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.2 +0.2 +0.3 -1.7
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.2 -1.3 +0.3 -0.2
stress Sisomicin 0.008 mg/ml N.D. +0.1 +0.0 +0.3 -1.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.2 -0.9 +0.2 -0.5
stress Sisomicin 0.008 mg/ml N.D. +0.4 +0.1 +0.4 -1.0
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x N.D. +0.3 -0.1 +0.6 -0.8
carbon source 2'-Deoxycytidine 10 mM (C) N.D. +0.2 +1.1 +0.2 -0.9
nitrogen source Thymidine (N) N.D. +0.4 -0.1 -0.5 +1.2
carbon source 2-Deoxyadenosine 4 mM (C) N.D. +0.2 +1.2 +0.1 -0.4
nitrogen source Cytosine (N) N.D. -0.0 -0.7 -0.1 +2.0
carbon source 2'-Deoxycytidine 5 mM (C) N.D. +0.3 +1.2 +0.3 -0.2
stress Cephalothin 0.16 mg/ml N.D. +1.4 -0.1 +0.0 +0.7
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x N.D. +0.3 -0.1 +0.2 +1.6
stress Cephalothin 0.16 mg/ml N.D. +1.7 +0.1 +0.3 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.3 +0.8 +0.2 +1.3
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. +0.4 +0.3 +0.3 +1.7
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