Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS24085	BWI76_RS24090	BWI76_RS24095	BWI76_RS24100	BWI76_RS24105
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	N.D.	-0.3	+0.2	-5.1	-6.2
stress	Sisomicin 0.008 mg/ml	N.D.	-0.2	+0.0	-3.1	-3.5
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	N.D.	-0.1	-0.2	-3.8	-0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.0	-0.1	-3.6	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	-0.0	+0.3	-3.0	-1.1
mixed community	LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL	N.D.	-0.2	-0.4	-2.2	-0.7
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	N.D.	-0.1	-0.1	-2.9	-0.3
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	N.D.	-0.0	-0.1	-2.8	-0.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	-0.2	-0.3	-1.8	-1.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	+0.0	+0.1	-3.1	-0.2
mixed community	LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	-0.0	+0.1	-3.2	+0.2
stress	Sisomicin 0.008 mg/ml	N.D.	-0.0	+0.1	-1.1	-1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.1	-0.3	-1.7	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.2	-0.2	-1.6	-1.1
stress	Nickel (II) chloride 1.5 mM	N.D.	-0.2	+0.1	-1.7	-0.9
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	N.D.	-0.1	-0.2	-2.0	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	-0.2	-0.0	-1.5	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	N.D.	-0.2	-0.0	-2.3	+0.1
stress	Paraquat dichloride 0.1 mg/ml	N.D.	-0.1	-0.2	-1.6	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+0.0	-0.1	-1.8	-0.5
stress	Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL	N.D.	+0.1	+0.1	-1.2	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	+0.2	-0.1	-1.8	-0.3
stress	Cobalt chloride 0.5 mM	N.D.	+0.1	+0.1	-1.7	-0.4
carbon source	m-Inositol (C)	N.D.	-0.2	-0.2	-1.8	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	+0.1	+0.0	-2.0	+0.3
nitrogen source	Glycine (N)	N.D.	-0.1	+0.1	-1.8	+0.4
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	N.D.	-0.2	+0.2	-1.6	+0.4
phage	KLEB14 MOI 0.1	N.D.	-0.0	+0.1	+2.1	-0.6
phage	KLEB29 MOI 1	N.D.	-0.1	-0.1	+2.0	+0.4
phage	K. M5a1 KLEB26 MOI 0.1	N.D.	+0.4	-0.0	+1.8	+1.1