Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS23925 and BWI76_RS23930 are separated by 169 nucleotidesBWI76_RS23930 and BWI76_RS23935 are separated by 198 nucleotidesBWI76_RS23935 and BWI76_RS23940 overlap by 8 nucleotidesBWI76_RS23940 and BWI76_RS23945 are separated by 10 nucleotides BWI76_RS23925: BWI76_RS23925 - ribose-5-phosphate isomerase, at 4,993,026 to 4,993,685 _RS23925 BWI76_RS23930: BWI76_RS23930 - transcriptional regulator ArgP, at 4,993,855 to 4,994,748 _RS23930 BWI76_RS23935: BWI76_RS23935 - methylmalonyl-CoA mutase, at 4,994,947 to 4,997,091 _RS23935 BWI76_RS23940: BWI76_RS23940 - ATPase/protein kinase, at 4,997,084 to 4,998,079 _RS23940 BWI76_RS23945: BWI76_RS23945 - methylmalonyl-CoA decarboxylase, at 4,998,090 to 4,998,875 _RS23945
Group Condition BWI76_RS23925 BWI76_RS23930 BWI76_RS23935 BWI76_RS23940 BWI76_RS23945
carbon source Inosine (C) N.D. -0.9 -0.2 -0.4 -0.3
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL N.D. -0.4 -0.0 -0.4 -0.7
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -2.5 +0.5 +0.0 +0.4
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL N.D. -1.3 +0.0 -0.0 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.2 -0.2 +0.1 -1.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x N.D. -1.3 +0.0 +0.3 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x N.D. -1.2 +0.5 +0.1 -0.5
carbon source D,L-Malic Acid (C) N.D. -1.2 +0.0 +0.3 -0.1
phage K. M5a1 KLEB26 MOI 0.1 N.D. +0.3 +0.0 -0.5 -0.9
carbon source D,L-Malic Acid (C) N.D. -1.7 +0.1 +0.1 +0.4
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL N.D. -1.4 +0.2 +0.0 +0.2
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL N.D. -1.3 +0.1 +0.1 +0.1
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x N.D. -1.3 +0.2 -0.1 +0.3
carbon source L-Sorbose (C) N.D. -1.2 +0.1 -0.1 +0.3
carbon source L-Sorbose (C) N.D. -1.3 +0.1 +0.3 +0.1
phage K. M5a1 KLEB23 MOI 10 N.D. +0.5 -0.4 -0.4 -0.5
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL N.D. -1.1 +0.2 -0.1 +0.3
phage KLEB17 MOI 1 N.D. -0.5 +0.2 -0.7 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.0 +0.5 -0.1 -0.9
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x N.D. -1.4 +0.1 +0.2 +0.5
phage KLEB17 MOI 1 N.D. -1.1 +0.4 +0.2 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.7 +0.5 +0.4 -0.4
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL N.D. -0.9 +0.1 -0.2 +0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.8 +0.2 -0.2 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.3 -0.3 +1.1 -0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -0.5 +0.5 +0.0 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.9 +0.1 +0.3 -0.6
micoeukaryotes Acanthamoeba sp., muxed culture-2 N.D. +0.9 -0.5 +0.6 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -0.3 -0.1 -0.4 +2.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.2 -0.1 +1.0 +0.7
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