Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS23710	BWI76_RS23715	BWI76_RS23720	BWI76_RS23725	BWI76_RS23730
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-2.9	-5.4	-1.1	-1.6	-4.9
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-3.8	-2.6	-1.3	-1.2	-4.3
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.6	-0.7	-0.2	+0.1	-0.2
nitrogen source	Gly-DL-Asp (N)	-0.8	+0.4	-0.6	+0.0	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.0	+0.4	-1.1	-0.0	-0.5
stress	Cobalt chloride 0.5 mM	+0.4	-0.6	-0.6	-0.3	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.5	-0.5	-0.5	+0.2	-0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.6	-0.8	+0.0	+0.1	-0.3
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.7	-0.2	-0.3	-0.1	-0.4
stress	Sisomicin 0.008 mg/ml	-0.3	-0.2	-0.3	+0.3	+0.5
phage	K. M5a1 KLEB23 MOI 10	+0.8	-0.2	-0.3	-0.1	-0.1
nitrogen source	Glucuronamide (N)	+0.5	+0.2	-0.6	-0.2	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.4	-0.4	-0.1	+0.7	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.9	-0.4	-0.3	+0.3	-0.0
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.9	-0.1	-0.1	+0.2	-0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.7	-0.3	+0.6	-0.3	+0.0
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.1	+0.6	+0.5	+0.1	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	+0.2	+1.2	+0.2	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8	-0.1	+0.6	+0.2	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.1	+1.5	+0.1	-0.4
carbon source	Gly-Glu (C)	+0.4	+0.3	+0.6	+0.6	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+1.0	-0.0	-0.1	+0.4
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	+0.4	+0.6	+0.3	+0.0	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.6	+0.5	+0.5	+0.1	-0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.3	+0.5	-0.0	+0.6	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.6	+0.5	+0.2	+0.4	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4	+0.3	-0.3	+0.4	+0.9
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	+0.5	+0.5	+0.2	+0.5	+0.3
stress	Paraquat dichloride 0.1 mg/ml	+0.4	+0.3	+1.2	-0.1	+0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.8	+0.6	+0.8	+0.2	-0.2