Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS23670	BWI76_RS23675	BWI76_RS23680	BWI76_RS23685	BWI76_RS23690
nitrogen source	Cytosine (N)	-0.2	+0.4	+0.4	+0.2	-4.6
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.2	+0.2	-0.6	+0.2	-2.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-0.1	-0.5	+0.3	-1.9
phage	KLEB1 MOI 10	-1.1	+0.2	-0.0	+0.2	-2.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.1	-0.0	-0.4	-0.0	-2.3
phage	KLEB31 MOI 1	-0.2	-0.2	-0.5	-0.2	-1.6
stress	Fungal_growth_media_mCAFEs_v1 with Aluminum chloride 2 mM	+0.2	+0.2	-0.3	+0.0	-2.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.2	+0.1	+0.3	-2.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6	-0.5	+0.0	+0.4	-1.5
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	+0.0	-0.5	+0.4	-0.1	-1.4
phage	KLEB28 MOI 1	+0.2	+0.2	+0.1	+0.1	-1.8
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	+0.5	-0.0	+0.1	+0.0	-1.8
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	+0.2	+0.5	-0.4	+0.1	-1.5
stress	Chloramphenicol 0.001 mg/ml	-0.7	+0.2	-1.0	+0.0	+0.8
nitrogen source	Thymidine (N)	+1.1	-0.3	-0.5	+0.1	-1.2
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.8	+0.0	-0.5	+0.2	-1.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.4	+0.6	-0.2	-0.2	-1.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.9	-0.4	-0.3	-0.1	+1.2
carbon source	D-Salicin (C)	-0.4	-0.2	-0.6	-0.1	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	+1.3	-0.3	+0.1	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8	-0.8	+0.5	+0.7	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	-0.3	+0.2	-0.2	+1.2
micoeukaryotes	Dictyostellum sp.mixed culture-1	+0.9	+0.7	-0.1	-0.0	-0.7
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	-0.5	+0.5	-0.4	+0.4	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	+1.0	-0.4	-0.1	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.3	+0.8	-0.1	+1.8
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.7	+0.4	-0.2	+0.2	+1.0
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	+0.7	+0.5	+0.1	-0.0	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7	-0.4	-0.0	-0.2	+2.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	-0.4	+0.9	+0.2	+5.2