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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS23620 and BWI76_RS23625 overlap by 4 nucleotides
BWI76_RS23625 and BWI76_RS23630 are separated by 166 nucleotides
BWI76_RS23630 and BWI76_RS23635 are separated by 40 nucleotides
BWI76_RS23635 and BWI76_RS23640 are separated by 517 nucleotides
BWI76_RS23620: BWI76_RS23620 - multidrug resistance transporter, at 4,925,232 to 4,926,710
_RS23620
BWI76_RS23625: BWI76_RS23625 - helix-turn-helix transcriptional regulator, at 4,926,707 to 4,929,418
_RS23625
BWI76_RS23630: BWI76_RS23630 - acetoin(diacetyl) reductase, at 4,929,585 to 4,930,364
_RS23630
BWI76_RS23635: BWI76_RS23635 - MFS transporter, at 4,930,405 to 4,931,958
_RS23635
BWI76_RS23640: BWI76_RS23640 - mannonate dehydratase, at 4,932,476 to 4,933,543
_RS23640
Group
Condition
BWI76
_RS23620
BWI76
_RS23625
BWI76
_RS23630
BWI76
_RS23635
BWI76
_RS23640
stress
Cobalt chloride 0.5 mM
-0.6
-0.3
+0.1
-0.1
+0.0
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.5
-0.5
-0.9
+0.2
-0.1
mixed community
LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
+0.1
-0.3
-0.4
+0.4
-0.1
nitrogen source
Gly-DL-Asp (N)
+0.1
-0.3
+0.3
-0.6
+0.1
mixed community
RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
+0.4
-0.2
-0.5
+0.2
-0.0
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
+0.3
-0.1
-0.7
+0.3
+0.2
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
+0.3
-0.5
-0.2
+0.4
-0.0
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
+0.5
-0.4
-0.2
+0.1
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
-0.1
+0.6
-0.2
+0.3
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
+0.3
-0.2
-0.3
+0.4
-0.2
stress
Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
+0.4
-0.3
-0.4
+0.4
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.6
+0.2
-0.1
-0.4
-0.1
phage
KLEB13 MOI 0.1
+0.5
+0.1
-0.5
+0.2
-0.0
nitrogen source
L-tyrosine (N)
+0.3
+0.1
+0.4
-0.5
-0.0
carbon source
D,L-Malic Acid (C)
-0.4
-0.0
+0.2
+0.5
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.2
+0.6
-0.4
+0.1
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.2
+0.3
-0.4
+0.2
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
-0.0
+0.2
-0.4
+0.5
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.3
+0.9
-0.0
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.1
-0.2
+0.5
+0.2
phage
K. M5a1 KLEB10 MOI 1
+0.2
+0.3
+0.4
+0.2
-0.2
phage
KLEB20 MOI 1
+0.4
-0.3
+0.4
+0.5
+0.0
micoeukaryotes
Acanthamoeba sp., muxed culture-2
+0.4
-0.0
+0.5
+0.4
-0.2
stress
Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
+0.4
+0.2
-0.1
+0.5
+0.1
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
+0.2
-0.1
+0.9
+0.1
+0.0
phage
KLEB17 MOI 0.1
+0.5
-0.1
+0.1
+0.6
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
+0.4
-0.1
+1.1
+0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.0
+1.2
+0.0
+0.1
stress
Sisomicin 0.008 mg/ml
-0.1
+0.2
+1.0
+0.0
+0.3
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days
-0.1
+0.3
+0.4
+1.0
+0.0
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