Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS23550	BWI76_RS23555	BWI76_RS23560	BWI76_RS23565	BWI76_RS23570
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	+0.0	-1.1	-0.5	-0.2
nitrogen source	Glucuronamide (N)	-0.1	-1.3	-0.2	-0.3	+0.1
nitrogen source	D-Alanine (N)	-0.1	+0.0	-1.6	+0.0	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	-0.2	-1.3	+0.1	-0.3
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.1	+0.4	-0.5	-0.4	-0.7
phage	K. M5a1 KLEB26 MOI 0.1	+0.0	-0.8	-0.8	+0.6	+0.2
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	-0.2	-0.2	-0.9	+0.6	-0.1
phage	KLEB17 MOI 1	-0.0	+0.8	-1.4	-0.1	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	-0.6	+0.9	-0.6	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.2	-0.9	+0.6	+0.0
lb dilute	Dilute LB (1/10)	+0.0	-0.8	+0.8	-0.1	-0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.3	-0.5	+0.7	+0.2	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	+0.2	-0.9	-0.2	+0.7
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.3	+0.6	-0.1	-0.6	+0.5
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	-0.2	-0.6	+0.4	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.0	+0.5	+0.6	-0.3	-0.4
carbon source	2-Deoxyadenosine 4 mM (C)	+0.1	+0.6	-0.7	+0.4	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.2	+1.0	-0.4	+0.4
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	+0.2	+1.2	-0.1	-0.4	+0.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.2	+0.9	-0.4	+0.5	+0.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.0	-0.6	+1.5	+0.3	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+1.1	-0.6	+0.0	+0.7
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.0	+2.0	-0.3	-0.2	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.2	+1.7	-0.1	+0.2	-0.2
nitrogen source	Gly-DL-Asp (N)	-0.1	+0.6	+0.6	+0.5	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.3	+0.3	+1.1	-0.3
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	-0.1	+0.3	+0.6	+0.6	+0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.2	+0.0	+1.8	+0.1	+0.0
phage	KLEB29 MOI 0.1	-0.1	+0.5	+0.4	+0.4	+0.5
ecofab	LB in EcoFAB_3.5mL	+0.2	-0.1	+2.1	-0.1	-0.3