Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS23450	BWI76_RS23455	BWI76_RS23460	BWI76_RS23465	BWI76_RS23470
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-2.6	-2.6	-0.1	-0.1	+0.3
phage	K. M5a1 KLEB26 MOI 0.1	-0.2	-0.7	-1.1	-0.8	-1.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-1.5	-1.9	-0.2	+0.3	+0.4
phage	KLEB20 MOI 1	-0.2	-1.7	+0.1	-0.5	-0.0
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.2	-0.9	-0.7	+0.1	+0.7
ecofab	LB in EcoFAB_3.5mL	+0.1	+0.1	+0.5	-0.5	-1.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.6	-0.7	+0.2	+0.2	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.1	-0.8	-0.3	+0.4	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.1	-1.2	+0.2	+0.2	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7	+0.6	-0.3	-0.0	-0.8
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	+0.1	+1.9	+0.2	-0.3	-1.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.2	-0.9	+0.3	+0.0	+0.8
nitrogen source	Glucuronamide (N)	+0.3	-1.0	+0.5	+0.2	+0.4
stress	Chloramphenicol 0.001 mg/ml	-0.3	+0.4	+1.2	-0.3	-0.2
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.4	+1.1	+0.0	-0.4	-0.3
ecofab	LB in EcoFAB_10mL	+0.0	+1.5	+0.0	-0.0	-0.7
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.5	+0.5	+0.4	+0.6	+0.5
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	+0.2	+0.6	-0.3	+0.3	+0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-0.2	+0.9	+0.2	+0.6	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.4	-0.3	+0.2	+0.7	+0.8
stress	Paraquat dichloride 0.1 mg/ml	+0.2	+1.1	+0.3	-0.2	+0.4
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-0.3	+0.8	+0.2	+0.9	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.2	+0.6	+0.7	+0.4	+0.6
mixed community	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.3	+0.5	+0.4	+0.7	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+2.2	+0.2	+0.0	+0.0
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.6	+0.1	+0.5	+0.6	+0.8
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.0	-0.5	+0.8	+0.9	+1.5
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.1	-0.0	+0.6	+0.9	+1.4
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	-0.1	+0.6	+0.5	+0.8	+0.9
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	-0.0	-0.1	+0.7	+1.0	+1.4