Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS22385 and BWI76_RS22390 are separated by 12 nucleotidesBWI76_RS22390 and BWI76_RS22395 are separated by 223 nucleotidesBWI76_RS22395 and BWI76_RS22400 are separated by 174 nucleotidesBWI76_RS22400 and BWI76_RS22405 are separated by 9 nucleotides BWI76_RS22385: BWI76_RS22385 - beta-1,4 mannanase, at 4,666,635 to 4,668,830 _RS22385 BWI76_RS22390: BWI76_RS22390 - maltoporin, at 4,668,843 to 4,670,186 _RS22390 BWI76_RS22395: BWI76_RS22395 - hypothetical protein, at 4,670,410 to 4,671,681 _RS22395 BWI76_RS22400: BWI76_RS22400 - PTS sugar transporter subunit IIB, at 4,671,856 to 4,672,170 _RS22400 BWI76_RS22405: BWI76_RS22405 - PTS cellobiose transporter subunit IIC, at 4,672,180 to 4,673,502 _RS22405
Group Condition BWI76_RS22385 BWI76_RS22390 BWI76_RS22395 BWI76_RS22400 BWI76_RS22405
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.3 -0.5 N.D. -0.3
carbon source D-Alanine (C) -0.3 -0.5 -0.1 N.D. -0.5
nitrogen source Thymine (N) +0.6 -0.3 -0.3 N.D. -1.3
nitrogen source Uridine (N) +0.0 -0.3 -0.0 N.D. -1.0
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -0.3 +0.1 N.D. -0.2
phage KLEB16 MOI 10 +0.1 -0.1 -0.3 N.D. -0.6
phage K. M5a1 KLEB23 MOI 10 -0.1 +0.1 -0.4 N.D. -0.6
phage K. M5a1 KLEB10 MOI 1 +0.2 +0.1 -0.4 N.D. -0.7
carbon source D-Cellobiose (C) +0.1 -0.1 +0.3 N.D. -0.9
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 -0.1 +0.1 N.D. -0.8
nitrogen source Glycine (N) +0.2 +0.3 -0.1 N.D. -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 +0.5 -0.1 N.D. -0.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 +0.4 -0.2 N.D. +0.1
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 -0.0 +0.3 N.D. -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.5 -0.5 N.D. -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 -0.2 +0.3 N.D. +0.4
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.4 -0.0 +0.4 N.D. -0.5
carbon source 2-Deoxyadenosine 4 mM (C) +0.2 +0.4 +0.2 N.D. -0.4
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.2 -0.3 +0.6 N.D. +0.1
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.3 -0.2 +0.4 N.D. +0.3
phage B3 MOi 1 +0.3 +0.2 +0.5 N.D. -0.2
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +0.1 -0.6 +0.5 N.D. +0.7
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.4 -0.0 +0.6 N.D. -0.3
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL +0.4 +0.1 +0.6 N.D. -0.1
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL +0.4 -0.2 +0.4 N.D. +0.4
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.1 -0.1 +0.5 N.D. +0.6
ecofab LB in EcoFAB_10mL -0.1 +0.3 -0.1 N.D. +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.2 +0.8 N.D. +0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.0 +0.4 +0.4 N.D. +0.4
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.6 -0.1 +0.7 N.D. +0.5
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BWI76_RS22385
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BWI76_RS22390
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